RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FUCA1P04066 466 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 GABRA5P31644 462 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SLC25A25Q6KCM7 469 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SCIMPQ6UWF3 145 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 OR2AP1Q8NGE2 309 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ADAMTS19Q8TE59 1207 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ABCB8Q9NUT2 735 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 PPM1HQ9ULR3 514 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 C2orf71A6NGG8 1288 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 H3BSA7 217 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SUN3Q8TAQ9 357 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 USP7Q93009 1102 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ADAM2Q99965 735 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 PCDHA9Q9Y5H5 950 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 CD48P09326 243 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 EPHX2P34913 555 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 PDZD3Q86UT5 571 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SLC34A3Q8N130 599 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ZDHHC5Q9C0B5 715 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 OR51E2Q9H255 320 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SLC17A5Q9NRA2 495 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 BET1O15155 118 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 CARD16Q5EG05 197 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 YOD1Q5VVQ6 348 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ABHD13Q7L211 337 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 FUBP1Q96AE4 644 aaKnown RBP4.78□□□□□ -1.64
PCDH9-201ENST00000377861 OR10H3O60404 316 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SLCO2B1O94956 709 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 BCKDHAP12694 445 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 GRK6P43250 576 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SSX1Q16384 188 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 GPR139Q6DWJ6 353 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 GATAD2AQ86YP4 633 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ARHGAP12Q8IWW6 846 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 CADM2Q8N3J6 435 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 NXPE3Q969Y0 559 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 PYCR2Q96C36 320 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 RSPRY1Q96DX4 576 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 MSANTD3Q96H12 275 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SLC22A11Q9NSA0 550 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 FMO4P31512 558 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 UBAP2LQ14157 1087 aaKnown RBP4.78□□□□□ -1.64
PCDH9-201ENST00000377861 FUT11Q495W5 492 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 FAM86B1Q8N7N1 296 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF689Q96CS4 500 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ZBTB45Q96K62 511 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SARS2Q9NP81 518 aaKnown RBP4.78□□□□□ -1.64
PCDH9-201ENST00000377861 MANBAO00462 879 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SEC14L5O43304 696 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 RDH16O75452 317 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM63AO94886 807 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 HLA-EP13747 358 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 EFEMP1Q12805 493 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 GPRC6AQ5T6X5 926 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 FTMTQ8N4E7 242 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 SUSD6Q92537 303 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 ATPIF1Q9UII2 106 aa4.78□□□□□ -1.64
PCDH9-201ENST00000377861 CCDC195A0A1B0GUA6 201 aa4.78□□□□□ -1.65
PCDH9-201ENST00000377861 ANXA3P12429 323 aa4.78□□□□□ -1.65
PCDH9-201ENST00000377861 CA9Q16790 459 aa4.78□□□□□ -1.65
PCDH9-201ENST00000377861 FAM26DQ5JW98 314 aa4.78□□□□□ -1.65
PCDH9-201ENST00000377861 C2orf74A8MZ97 194 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 FDXRP22570 491 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 OR6Q1Q8NGQ2 317 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SNAPC3Q92966 411 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF436Q9C0F3 470 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ENPP5Q9UJA9 477 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 HCN2Q9UL51 889 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 OSMP13725 252 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 PEX2P28328 305 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 FBXO42Q6P3S6 717 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SPRTNQ9H040 489 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 OBP2AQ9NY56 170 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 RIMS3Q9UJD0 308 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SRPX2O60687 465 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 S100A13Q99584 98 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 BABAM2Q9NXR7 383 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 DENND6AQ8IWF6 608 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 MAP6Q96JE9 813 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 B3GNT5Q9BYG0 378 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ASAH2Q9NR71 780 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SLC2A4RGQ9NR83 387 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 MGAT4AQ9UM21 535 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ERVK-21P61565 698 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 MLLT11Q13015 90 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 CLEC20AQ6ZU45 233 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 OR4C15Q8NGM1 316 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 C1QTNF1Q9BXJ1 281 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 GALPQ9UBC7 116 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 EI24O14681 340 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 MMP3P08254 477 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 HOXA11P31270 313 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SNAPC1Q16533 368 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ELP2Q6IA86 826 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 FRMPD2BQ6IN97 320 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ATG14Q6ZNE5 492 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 HDDC3Q8N4P3 179 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms