RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CTAGE6Q86UF2 777 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CTAGE4Q8IX94 777 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 KBTBD2Q8IY47 623 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 SPATA6LQ8N4H0 392 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 ZNF740Q8NDX6 193 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 TRPV3Q8NET8 790 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 OR51Q1Q8NH59 317 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 NT5CQ8TCD5 201 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 UBXN10Q96LJ8 280 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CAPS2Q9BXY5 557 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 ILKAPQ9H0C8 392 aaPredicted RBP15.92■□□□□ 0.14
HMGN4-201ENST00000377575 SPNS1Q9H2V7 528 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 EPS8L2Q9H6S3 715 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 GPRC5BQ9NZH0 403 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 C19orf25Q9UFG5 118 aaPredicted RBP15.92■□□□□ 0.14
HMGN4-201ENST00000377575 RNF112Q9ULX5 631 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 B3GNT3Q9Y2A9 372 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 NAALAD2Q9Y3Q0 740 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CPAMD8Q8IZJ3 1885 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 LOC102723996A0A087X1L8 192 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 IGHV1-45A0A0A0MS14 117 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 FAM155BO75949 473 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 ALOX12P18054 663 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 IL10P22301 178 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 SNRPNP63162 240 aaKnown RBP15.91■□□□□ 0.14
HMGN4-201ENST00000377575 OR4D1Q15615 310 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 GLE1Q53GS7 698 aaKnown RBP15.91■□□□□ 0.14
HMGN4-201ENST00000377575 SULT1C3Q6IMI6 304 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 TMEM205Q6UW68 189 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 CMC1Q7Z7K0 106 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 PDSS2Q86YH6 399 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 AFAP1L2Q8N4X5 818 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 PDPRQ8NCN5 879 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 TTLQ8NG68 377 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 KIAA1191Q96A73 305 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 OR1F2PQ96R84 312 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 WDR77Q9BQA1 342 aaPredicted RBP15.91■□□□□ 0.14
HMGN4-201ENST00000377575 MESP1Q9BRJ9 268 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 VN1R1Q9GZP7 353 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 CD274Q9NZQ7 290 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 LUZP4Q9P127 313 aa15.91■□□□□ 0.14
HMGN4-201ENST00000377575 SHANK1Q9Y566 2161 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 HAX1O00165 279 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 VPS4BO75351 444 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 H2AFYO75367 372 aaKnown RBP15.9■□□□□ 0.14
HMGN4-201ENST00000377575 SLC35E2BP0CK96 405 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 GSTM2P28161 218 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 GGT5P36269 586 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 GDF5P43026 501 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 Q0VFX4 171 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 RBBP5Q15291 538 aaKnown RBP15.9■□□□□ 0.14
HMGN4-201ENST00000377575 C18orf21Q32NC0 220 aaPredicted RBP15.9■□□□□ 0.14
HMGN4-201ENST00000377575 RIPOR1Q6ZS17 1223 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 RELL1Q8IUW5 271 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 IQCKQ8N0W5 287 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 KRT78Q8N1N4 520 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 Q8NA96 180 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 NOA1Q8NC60 698 aaKnown RBP15.9■□□□□ 0.14
HMGN4-201ENST00000377575 KIF18AQ8NI77 898 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 STAG3L4Q8TBR4 150 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 PPP4R1Q8TF05 950 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 EXT2Q93063 718 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 TRIM44Q96DX7 344 aaPredicted RBP15.9■□□□□ 0.14
HMGN4-201ENST00000377575 MOCOSQ96EN8 888 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 CYTH2Q99418 400 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 FMO2Q99518 471 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 TMEM79Q9BSE2 394 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 PITHD1Q9GZP4 211 aaPredicted RBP15.9■□□□□ 0.14
HMGN4-201ENST00000377575 ZNF700Q9H0M5 742 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 NMRAL1Q9HBL8 299 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 DNAJC11Q9NVH1 559 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 VPS4AQ9UN37 437 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 SCN2AQ99250 2005 aa15.9■□□□□ 0.14
HMGN4-201ENST00000377575 PRRC2CQ9Y520 2896 aaKnown RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ASH1LQ9NR48 2969 aaKnown RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 A0A087X1B8 175 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ZNF860A6NHJ4 632 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 CLGNO14967 610 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 GALR3O60755 368 aaPredicted RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 JRKO75564 520 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 STK16O75716 305 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SERPINA7P05543 415 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 UQCRHP07919 91 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 LTA4HP09960 611 aaKnown RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 PRR35P0CG20 571 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ZNF888P0CJ79 500 aaPredicted RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 C1GALT1C1LP0DN25 315 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ICAM2P13598 275 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 AGTR2P50052 363 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SLBPQ14493 270 aaKnown RBP eCLIP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 PCOLCEQ15113 449 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 UAP1Q16222 522 aaPredicted RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 DEFB134Q4QY38 66 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 CRB2Q5IJ48 1285 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 IGFL2Q6UWQ7 119 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ISLR2Q6UXK2 745 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SLCO4C1Q6ZQN7 724 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SNX31Q8N9S9 440 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ANKRD53Q8N9V6 530 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SEC16BQ96JE7 1060 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms