RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 IRF5Q13568 498 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 C7orf57Q8NEG2 295 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 LAMP5Q9UJQ1 280 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 ACSL5Q9ULC5 683 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 LOC730098B7Z3J9 87 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 TMEM63AO94886 807 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 AP2S1P53680 142 aaPredicted RBP22.39■■□□□ 1.18
NPAS3-201ENST00000346562 RAB8AP61006 207 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 CARTPTQ16568 116 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 AGTRAPQ6RW13 159 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 SLC36A4Q6YBV0 504 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 GNPDA2Q8TDQ7 276 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 TTYH2Q9BSA4 534 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 SIX2Q9NPC8 291 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 SLC3A1Q07837 685 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 RDH8Q9NYR8 311 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 DNMT3AQ9Y6K1 912 aaPredicted RBP22.39■■□□□ 1.17
NPAS3-201ENST00000346562 SIX3O95343 332 aaPredicted RBP22.39■■□□□ 1.17
NPAS3-201ENST00000346562 H6PDO95479 791 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 WSCD2Q2TBF2 565 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF598Q86UK7 904 aaKnown RBP22.39■■□□□ 1.17
NPAS3-201ENST00000346562 NPAS3Q8IXF0 933 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 OR8H3Q8N146 312 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 THAP6Q8TBB0 222 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 TCEAL3Q969E4 200 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 SLC7A6OSQ96CW6 309 aaPredicted RBP22.39■■□□□ 1.17
NPAS3-201ENST00000346562 WDR77Q9BQA1 342 aaPredicted RBP22.39■■□□□ 1.17
NPAS3-201ENST00000346562 PCDHB14Q9Y5E9 798 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 SNIP1Q8TAD8 396 aaKnown RBP22.39■■□□□ 1.17
NPAS3-201ENST00000346562 OTUB2Q96DC9 234 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 EBF3Q9H4W6 596 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 TMPRSS11EQ9UL52 423 aa22.39■■□□□ 1.17
NPAS3-201ENST00000346562 TCRBV21S2A2A0A5A6 115 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 C8orf89P0DMQ9 161 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 ADAM15Q13444 863 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 AOC2O75106 756 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 KLF8O95600 359 aaPredicted RBP22.38■■□□□ 1.17
NPAS3-201ENST00000346562 MAGEA11P43364 429 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 GNG2P59768 71 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 AQP11Q8NBQ7 271 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 OR2L2Q8NH16 312 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 TMEM234Q8WY98 164 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 IL4I1Q96RQ9 567 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 NLE1Q9NVX2 485 aaPredicted RBP22.38■■□□□ 1.17
NPAS3-201ENST00000346562 C8BP07358 591 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 PLEKHS1Q5SXH7 462 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 EIF5AL1Q6IS14 154 aaKnown RBP22.38■■□□□ 1.17
NPAS3-201ENST00000346562 PYURFQ96I23 114 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 G6PC3Q9BUM1 346 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 YTHDF1Q9BYJ9 559 aaKnown RBP22.38■■□□□ 1.17
NPAS3-201ENST00000346562 B4GALT7Q9UBV7 327 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 PCDHGB6Q9Y5F9 930 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 A0A1B0GVT2 93 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 PFKLP17858 780 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 MVKQ03426 396 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 C1orf94Q6P1W5 598 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 GALNT15Q8N3T1 639 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 DPAGT1Q9H3H5 408 aa22.38■■□□□ 1.17
NPAS3-201ENST00000346562 FAM159BA6NKW6 160 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 EPCAMP16422 314 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 OR2B6P58173 313 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 POU6F2P78424 691 aaPredicted RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 NRROSQ86YC3 692 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 FANK1Q8TC84 345 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 P2RY13Q9BPV8 354 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 SLC5A7Q9GZV3 580 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 GALTP07902 379 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF16P17020 682 aaPredicted RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 SEC23BQ15437 767 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 BRF2Q9HAW0 419 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 GIN1Q9NXP7 522 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 HLA-DPB1P04440 258 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 PAFAH1B3Q15102 231 aaKnown RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF550Q7Z398 422 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 STON2Q8WXE9 905 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF516Q92618 1163 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 OSTF1Q92882 214 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 TMBIM1Q969X1 311 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 PRTFDC1Q9NRG1 225 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 NCDNQ9UBB6 729 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 NID2Q14112 1375 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 TEX13DA0A0J9YY54 714 aaPredicted RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 SHOX2O60902 331 aaPredicted RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 MAGEA12P43365 314 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF84P51523 738 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 RPS21P63220 83 aaKnown RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 SERINC3Q13530 473 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 CDK10Q15131 360 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 RBM20Q5T481 1227 aaKnown RBP22.37■■□□□ 1.17
NPAS3-201ENST00000346562 CD244Q9BZW8 370 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 RMI1Q9H9A7 625 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 SLC17A6Q9P2U8 582 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 PRAMEF11O60813 436 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 PRKD3O94806 890 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 TYRP1P17643 537 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 FAM214AQ32MH5 1076 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 CYP27C1Q4G0S4 372 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 ZNF461Q8TAF7 563 aa22.37■■□□□ 1.17
NPAS3-201ENST00000346562 SLC35B2Q8TB61 432 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms