RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KERAO60938 352 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 DNAJB6O75190 326 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 JRKO75564 520 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 B3GALT4O96024 378 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 IGHEP01854 428 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 FAM153BP0C7A2 387 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 SLC35G6P0C7Q6 338 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 C1GALT1C1LP0DN25 315 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 MTHFD2P13995 350 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 AHRP35869 848 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 MAGEA12P43365 314 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 PGDP52209 483 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 SOX8P57073 446 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 CDC16Q13042 620 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 PWP1Q13610 501 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 RAPSNQ13702 412 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 RBBP7Q16576 425 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 FAM153CQ494X1 144 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 ATG9BQ674R7 924 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 TBC1D1Q86TI0 1168 aaPredicted RBP14.45□□□□□ -0.1
PRKN-201ENST00000338468 IFT20Q8IY31 132 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 UHMK1Q8TAS1 419 aaKnown RBP14.45□□□□□ -0.1
PRKN-201ENST00000338468 STAG3L4Q8TBR4 150 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 NT5CQ8TCD5 201 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 CREB3L4Q8TEY5 395 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 ISL2Q96A47 359 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 C8orf44Q96CB5 159 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 PSMG3-AS1Q96PY0 264 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 PAFAH2Q99487 392 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 SMAD5Q99717 465 aaKnown RBP14.45□□□□□ -0.1
PRKN-201ENST00000338468 AIF1LQ9BQI0 150 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 YIPF2Q9BWQ6 316 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 TXLNGYQ9BZA5 131 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 L2HGDHQ9H9P8 463 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 C14orf105Q9NVL8 296 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 WWOXQ9NZC7 414 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 CD274Q9NZQ7 290 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 ZFP69BQ9UJL9 534 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 RNF112Q9ULX5 631 aa14.45□□□□□ -0.1
PRKN-201ENST00000338468 SPTBN1Q01082 2364 aaKnown RBP14.45□□□□□ -0.1
PRKN-201ENST00000338468 UTP20O75691 2785 aaKnown RBP14.45□□□□□ -0.1
PRKN-201ENST00000338468 SCN3AQ9NY46 2000 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 UNC79Q9P2D8 2635 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 A0A087X1B8 175 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 A0A096LPK6 155 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 A0A1W2PQ72 361 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 IDSB3KWA1 339 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 C4orf51C9J302 202 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 UBXN8O00124 270 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 RDH16O75452 317 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 STK16O75716 305 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 KLHL18O94889 574 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 BMP10O95393 424 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 GNAZP19086 355 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 AVPR1BP47901 424 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 AGTR2P50052 363 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 EMP2P54851 167 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 Q0VFX4 171 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 KLRB1Q12918 225 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 CCDC91Q7Z6B0 441 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 GALNT16Q8N428 558 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 CLEC1AQ8NC01 280 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 DCAKDQ8WVC6 231 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 EXT2Q93063 718 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 SLC6A16Q9GZN6 736 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 KLHL31Q9H511 634 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 DNAJC11Q9NVH1 559 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 GPRC5BQ9NZH0 403 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 NUDT4Q9NZJ9 180 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 HCN3Q9P1Z3 774 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 COPG2Q9UBF2 871 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 PLAAQ9Y263 795 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 NAALAD2Q9Y3Q0 740 aa14.44□□□□□ -0.1
PRKN-201ENST00000338468 BLACEA4D250 179 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 ZNF860A6NHJ4 632 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 GALR3O60755 368 aaPredicted RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 IPO13O94829 963 aaKnown RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 TBX6O95947 436 aaPredicted RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 SERPIND1P05546 499 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 SMIM10L1P0DMW3 83 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 CD22P20273 847 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 GCAP28676 217 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 SERPINB8P50452 374 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 SLBPQ14493 270 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRKN-201ENST00000338468 MYBPC3Q14896 1274 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 RBBP5Q15291 538 aaKnown RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 TUBB8Q3ZCM7 444 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 TMEM205Q6UW68 189 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 VN1R5Q7Z5H4 357 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 ATCAYQ86WG3 371 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.43□□□□□ -0.11e-7■■■■■ 323.4
PRKN-201ENST00000338468 PLD6Q8N2A8 252 aaKnown RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 AMER2Q8N7J2 671 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 OR5T3Q8NGG3 340 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 OR51Q1Q8NH59 317 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 RHEBL1Q8TAI7 183 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 UTP15Q8TED0 518 aaKnown RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 UBTD2Q8WUN7 234 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 WDR34Q96EX3 536 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 SMIM10Q96HG1 83 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms