RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 LINGO1Q96FE5 620 aa18.92■□□□□ 0.62
SERF1A-201ENST00000317633 PEX11GQ96HA9 241 aa18.92■□□□□ 0.62
SERF1A-201ENST00000317633 SARGQ9BW04 601 aa18.92■□□□□ 0.62
SERF1A-201ENST00000317633 UNKQ9C0B0 810 aaKnown RBP18.92■□□□□ 0.62
SERF1A-201ENST00000317633 CHST11Q9NPF2 352 aa18.92■□□□□ 0.62
SERF1A-201ENST00000317633 ARL15Q9NXU5 204 aa18.92■□□□□ 0.62
SERF1A-201ENST00000317633 OR2W5A6NFC9 320 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 MAGEB17A8MXT2 336 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 CDK2AP1O14519 115 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 NDUFS4O43181 175 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 JAK1P23458 1154 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 EEF1DP29692 281 aaKnown RBP18.91■□□□□ 0.62
SERF1A-201ENST00000317633 IL2P60568 153 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 TIAL1Q01085 375 aaKnown RBP eCLIP18.91■□□□□ 0.62
SERF1A-201ENST00000317633 PMP22Q01453 160 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 RHAGQ02094 409 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 PDAP1Q13442 181 aaKnown RBP18.91■□□□□ 0.62
SERF1A-201ENST00000317633 PWP1Q13610 501 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 OR1C1Q15619 314 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 PHKG1Q16816 387 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 KRTCAP3Q53RY4 240 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 RNASEH2BQ5TBB1 312 aaKnown RBP18.91■□□□□ 0.62
SERF1A-201ENST00000317633 MCEMP1Q8IX19 187 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 TMEM178AQ8NBL3 297 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 FAM98AQ8NCA5 519 aaKnown RBP18.91■□□□□ 0.62
SERF1A-201ENST00000317633 MDS2Q8NDY4 140 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 ABHD11Q8NFV4 315 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 ACTRT1Q8TDG2 376 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 ATL1Q8WXF7 558 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 SNF8Q96H20 258 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 SH3BGRL2Q9UJC5 107 aa18.91■□□□□ 0.62
SERF1A-201ENST00000317633 OR1F1O43749 312 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 SLC19A2O60779 497 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 CDC123O75794 336 aaPredicted RBP18.9■□□□□ 0.62
SERF1A-201ENST00000317633 AHSGP02765 367 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 ESRRAP11474 423 aaPredicted RBP18.9■□□□□ 0.62
SERF1A-201ENST00000317633 CD96P40200 585 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 CDKN2DP55273 166 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 OR4D2P58180 307 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 SRSF11Q05519 484 aaKnown RBP18.9■□□□□ 0.62
SERF1A-201ENST00000317633 RGS1Q08116 209 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 RBM20Q5T481 1227 aaKnown RBP18.9■□□□□ 0.62
SERF1A-201ENST00000317633 BNC2Q6ZN30 1099 aaPredicted RBP18.9■□□□□ 0.62
SERF1A-201ENST00000317633 GALNT7Q86SF2 657 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 CNTN4Q8IWV2 1026 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 LGI4Q8N135 537 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 OR4K1Q8NGD4 311 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 THAP3Q8WTV1 239 aaPredicted RBP18.9■□□□□ 0.62
SERF1A-201ENST00000317633 TBC1D20Q96BZ9 403 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 MAGED4Q96JG8 741 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 KLHL1Q9NR64 748 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 LRBAP50851 2863 aa18.9■□□□□ 0.62
SERF1A-201ENST00000317633 TRBC2A0A5B9 178 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ZNF860A6NHJ4 632 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 GALR3O60755 368 aaPredicted RBP18.89■□□□□ 0.61
SERF1A-201ENST00000317633 FHP07954 510 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 PRF1P14222 555 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ALOX12P18054 663 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 GABRB3P28472 473 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ALDH6A1Q02252 535 aaKnown RBP18.89■□□□□ 0.61
SERF1A-201ENST00000317633 OC90Q02509 493 aaPredicted RBP18.89■□□□□ 0.61
SERF1A-201ENST00000317633 CSHL1Q14406 222 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 USP10Q14694 798 aaKnown RBP18.89■□□□□ 0.61
SERF1A-201ENST00000317633 XKRXQ6PP77 449 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ABHD13Q7L211 337 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 STRA8Q7Z7C7 330 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 SHISA5Q8N114 240 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 AFAP1L2Q8N4X5 818 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ZNF740Q8NDX6 193 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 OR56A3Q8NH54 315 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 PYCR2Q96C36 320 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 CERS2Q96G23 380 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 SCMH1Q96GD3 660 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 SIGLEC12Q96PQ1 595 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 OSBPL9Q96SU4 736 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 RBCK1Q9BYM8 510 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 PPANQ9NQ55 473 aaKnown RBP18.89■□□□□ 0.61
SERF1A-201ENST00000317633 LANCL2Q9NS86 450 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ANKRD10Q9NXR5 420 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ASIC3Q9UHC3 531 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 CORO1CQ9ULV4 474 aaPredicted RBP18.89■□□□□ 0.61
SERF1A-201ENST00000317633 ABCA12Q86UK0 2595 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 PCNX1Q96RV3 2341 aa18.89■□□□□ 0.61
SERF1A-201ENST00000317633 GTF3C1Q12789 2109 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 GABRR3A8MPY1 467 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 FAM227AF5H4B4 570 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 DNALI1O14645 258 aaPredicted RBP18.88■□□□□ 0.61
SERF1A-201ENST00000317633 SERPIND1P05546 499 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 ENO2P09104 434 aaPredicted RBP18.88■□□□□ 0.61
SERF1A-201ENST00000317633 ELAVL4P26378 380 aaKnown RBP18.88■□□□□ 0.61
SERF1A-201ENST00000317633 HTR1EP28566 365 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 PTGER4P35408 488 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 SMSP52788 366 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 SLC26A5P58743 744 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 MEF2AQ02078 507 aaPredicted RBP18.88■□□□□ 0.61
SERF1A-201ENST00000317633 ZNF630Q2M218 657 aaPredicted RBP18.88■□□□□ 0.61
SERF1A-201ENST00000317633 DEFB134Q4QY38 66 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 SPINK14Q6IE38 97 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 OR5T3Q8NGG3 340 aa18.88■□□□□ 0.61
SERF1A-201ENST00000317633 TSLPQ969D9 159 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms