RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 OR8J1Q8NGP2 316 aa18.68■□□□□ 0.58
USP48-201ENST00000308271 GPR150Q8NGU9 434 aa18.68■□□□□ 0.58
USP48-201ENST00000308271 SETD6Q8TBK2 473 aa18.68■□□□□ 0.58
USP48-201ENST00000308271 PIP5K1AQ99755 562 aa18.68■□□□□ 0.58
USP48-201ENST00000308271 CORO1BQ9BR76 489 aa18.68■□□□□ 0.58
USP48-201ENST00000308271 TMED9Q9BVK6 235 aa18.68■□□□□ 0.58
USP48-201ENST00000308271 SAP18O00422 153 aaKnown RBP18.67■□□□□ 0.58
USP48-201ENST00000308271 CKMT1AP12532 417 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 GUCA1AP43080 201 aaPredicted RBP18.67■□□□□ 0.58
USP48-201ENST00000308271 CDH11P55287 796 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 EXOC3L2Q2M3D2 409 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 LIPKQ5VXJ0 399 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 RANBP3LQ86VV4 465 aaPredicted RBP18.67■□□□□ 0.58
USP48-201ENST00000308271 FERD3LQ96RJ6 166 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 GPR83Q9NYM4 423 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 F2P00734 622 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 ITGAMP11215 1152 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 CRISP1P54107 249 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 ZNF691Q5VV52 312 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 AGAP6Q5VW22 663 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 PSAPL1Q6NUJ1 521 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 OR4C6Q8NH72 309 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 AGAP4Q96P64 663 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 C16orf70Q9BSU1 422 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 OR51V1Q9H2C8 321 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 CLCA3PQ9Y6N3 262 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 C1QTNF3-AMACRE9PGA6 284 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 IQCF3P0C7M6 154 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 SHMT2P34897 504 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 MAGEA12P43365 314 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 FADDQ13158 208 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 MAD2L1BPQ15013 274 aaPredicted RBP18.67■□□□□ 0.58
USP48-201ENST00000308271 PCBP2Q15366 365 aaKnown RBP eCLIP18.67■□□□□ 0.58
USP48-201ENST00000308271 ATP13A5Q4VNC0 1218 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 PKDCCQ504Y2 493 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 KDELC1Q6UW63 502 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 LINGO2Q7L985 606 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 PEG10Q86TG7 708 aaKnown RBP18.67■□□□□ 0.58
USP48-201ENST00000308271 NXPE1Q8N323 547 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 Q8N402 240 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 SLC22A17Q8WUG5 538 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 C1QTNF7Q9BXJ2 289 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 ENAMQ9NRM1 1142 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 PCDHGB1Q9Y5G3 927 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 FUCA1P04066 466 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 HTR2BP41595 481 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 CLEC12AQ5QGZ9 265 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 GDPGP1Q6ZNW5 385 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 RTL4Q6ZR62 310 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 ZNF767PQ75MW2 155 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 VTCN1Q7Z7D3 282 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 SUV39H2Q9H5I1 410 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 STUB1Q9UNE7 303 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 PCDHB14Q9Y5E9 798 aa18.67■□□□□ 0.58
USP48-201ENST00000308271 A0A0U1RQF3 1178 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 ZSCAN5BA6NJL1 495 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 FAM47E-STBD1D6RA91 191 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 JUNBP17275 347 aaPredicted RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 EIF4HQ15056 248 aaKnown RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 GALNT7Q86SF2 657 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 JPH3Q8WXH2 748 aaPredicted RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 SLC9A6Q92581 669 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 C12orf71A8MTZ7 269 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 C6orf47O95873 294 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 CA5AP35218 305 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 SLC9A3P48764 834 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 PPP2R2BQ00005 443 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 DSG2Q14126 1118 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 ADGRD2Q7Z7M1 963 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 PELI3Q8N2H9 469 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 PJA1Q8NG27 643 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 FARSBQ9NSD9 589 aaKnown RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 PCDHA9Q9Y5H5 950 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 LRP5O75197 1615 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 A0A0D9SEW6 157 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 TLL1O43897 1013 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 SLC19A2O60779 497 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 SEC14L2O76054 403 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 ATP1B2P14415 290 aaPredicted RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 SEMG2Q02383 582 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 ZNF763Q0D2J5 394 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 KCTD11Q693B1 232 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 LETMD1Q6P1Q0 360 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 ZNF613Q6PF04 617 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 AGTRAPQ6RW13 159 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 SMARCD3Q6STE5 483 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 LINC00299Q6ZSB3 139 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 BEND7Q8N7W2 519 aaPredicted RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 RANBP3Q9H6Z4 567 aaPredicted RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 ARNT2Q9HBZ2 717 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 HEBP1Q9NRV9 189 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 ABHD14A-ACY1A0A1B0GW23 586 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 OR14I1A6ND48 311 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 PDCD5O14737 125 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 PLD2O14939 933 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 HOXA11P31270 313 aaPredicted RBP18.66■□□□□ 0.58
USP48-201ENST00000308271 GTDC1Q4AE62 458 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 DPY19L3Q6ZPD9 716 aa18.66■□□□□ 0.58
USP48-201ENST00000308271 PHC2Q8IXK0 858 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms