RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PRUNE2Q8WUY3 3088 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 GABRR3A8MPY1 467 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 CHURC1-FNTBB4DL54 471 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 B3GALT4O96024 378 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 VIPP01282 170 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 IGHV4-34P06331 123 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 ANXA6P08133 673 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 F3P13726 295 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 ABATP80404 500 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 ZNF542PQ5EBM4 170 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 DEPDC1Q5TB30 811 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 TAF8Q7Z7C8 310 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 AMIGO2Q86SJ2 522 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 OR2A1Q8NGT9 310 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 MIEF2Q96C03 454 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 KLHDC7BQ96G42 594 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 LTB4R2Q9NPC1 389 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 MCM8Q9UJA3 840 aa13.91□□□□□ -0.18
SHCBP1-201ENST00000303383 HNRNPRO43390 633 aaKnown RBP13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 CDKN2CP42773 168 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 PXNP49023 591 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 MAPK12P53778 367 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 CSNK1G2P78368 415 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 TMEM126BQ8IUX1 230 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 GALNT4Q8N4A0 578 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 C16orf78Q8WTQ4 265 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 TSC22D4Q9Y3Q8 395 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 UMPSP11172 480 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 FASP25445 335 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 ALDH9A1P49189 494 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 MTAPQ13126 283 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 LRIF1Q5T3J3 769 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 WASH2PQ6VEQ5 465 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 SLC9B2Q86UD5 537 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 KBTBD2Q8IY47 623 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 CLECL1Q8IZS7 167 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 SIX5Q8N196 739 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 DEFB119Q8N690 84 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 GOLM1Q8NBJ4 401 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 ADCY4Q8NFM4 1077 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 ZNF583Q96ND8 569 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 RHBGQ9H310 441 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 SERHLQ9NQF3 203 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 CCM2LQ9NUG4 571 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 OR6C2Q9NZP2 312 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 RIMS3Q9UJD0 308 aa13.9□□□□□ -0.18
SHCBP1-201ENST00000303383 CLIC1O00299 241 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 PIM1P11309 404 aaPredicted RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 NUDT1P36639 197 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 PUS10Q3MIT2 529 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 PRRT3Q5FWE3 981 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 LILRA2Q8N149 483 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 ANKRD53Q8N9V6 530 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 OR4A15Q8NGL6 344 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 OR10G6Q8NH81 332 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 RGMAQ96B86 450 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 SLC22A18Q96BI1 424 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 C11orf24Q96F05 449 aaPredicted RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 RNF145Q96MT1 663 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 NELL2Q99435 816 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 SORBS1Q9BX66 1292 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 MS4A8Q9BY19 250 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 TMEM184CQ9NVA4 438 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 RTCAO00442 366 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 SEMA3DO95025 777 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 EML2O95834 649 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 C7P10643 843 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 FCGR1AP12314 374 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 DDX5P17844 614 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 BLKP51451 505 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 OGFRL1Q5TC84 451 aaPredicted RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 ABI3BPQ7Z7G0 1075 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 DTWD1Q8N5C7 304 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 NT5DC2Q9H857 520 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 C2orf42Q9NWW7 574 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 VPS4AQ9UN37 437 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 GSAPA4D1B5 854 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 NDUFS4O43181 175 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 ZW10O43264 779 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 IGLV3-19P01714 112 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 PLA2G16P53816 162 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 AQP4P55087 323 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 POLE2P56282 527 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 LRRC74AQ0VAA2 488 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 NUDT13Q86X67 352 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 MSRB3Q8IXL7 192 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 MICU2Q8IYU8 434 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 FRMD1Q8N878 549 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 OR2L3Q8NG85 312 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 Q9H521 79 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 IKZF5Q9H5V7 419 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 MYNNQ9NPC7 610 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 SLC6A13Q9NSD5 602 aa13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.89□□□□□ -0.19
SHCBP1-201ENST00000303383 PRR19A6NJB7 356 aa13.88□□□□□ -0.19
SHCBP1-201ENST00000303383 PEX1O43933 1283 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms