RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PLD4Q96BZ4 506 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 HSPBAP1Q96EW2 488 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 EFCAB11Q9BUY7 163 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A7Q9HAW7 530 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A10Q9HAW8 530 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A8Q9HAW9 530 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 MRM3Q9HC36 420 aaKnown RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CD320Q9NPF0 282 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 VPS29Q9UBQ0 182 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CLIC1O00299 241 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 SHOXO15266 292 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 TNFP01375 233 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 IRF2P14316 349 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 SLC6A6P31641 620 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 HSD11B2P80365 405 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UBE2UQ5VVX9 321 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 OTOP2Q7RTS6 562 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 SH3RF1Q7Z6J0 888 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 PLD5Q8N7P1 536 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 TPT1P8Q9HAU6 139 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CD93Q9NPY3 652 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 XPNPEP2O43895 674 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 GTF2F2P13984 249 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ADH7P40394 386 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ERVK-8P63133 956 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 TMEM69Q5SWH9 247 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ADGRD1Q6QNK2 874 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 SLC24A5Q71RS6 500 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 IFNL1Q8IU54 200 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 TEX19Q8NA77 164 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 GLYATL2Q8WU03 294 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 KIAA1143Q96AT1 154 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 MAPKAP1Q9BPZ7 522 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 REV1Q9UBZ9 1251 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 RBM47A0AV96 593 aaKnown RBP10.08□□□□□ -0.8
CLIP1-201ENST00000302528 FLRT2O43155 660 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TLX2O43763 284 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-201ENST00000302528 MT-ND5P03915 603 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 S1PR1P21453 382 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 RGS6P49758 472 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 MVKQ03426 396 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 IL10RBQ08334 325 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF616Q08AN1 781 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SEMA3AQ14563 771 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SLAIN1Q8ND83 568 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 STK35Q8TDR2 534 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CMTM7Q96FZ5 175 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TMEM109Q9BVC6 243 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 OR51I1Q9H343 314 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 B4GALT2O60909 372 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CNOT4O95628 575 aaKnown RBP10.08□□□□□ -0.8
CLIP1-201ENST00000302528 KLK1P06870 262 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SPIN4Q56A73 249 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 KRBOX4Q5JUW0 171 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 DPY19L4Q7Z388 723 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CPT1BQ92523 772 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CPXM1Q96SM3 734 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 HERC2P3Q9BVR0 1158 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TSSK6Q9BXA6 273 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 UBQLN2Q9UHD9 624 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ADAM18Q9Y3Q7 739 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 WNT9AO14904 365 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CYP3A5P20815 502 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SLC18A2Q05940 514 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 DEFB132Q7Z7B7 95 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 OR6N2Q8NGY6 317 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CIDECQ96AQ7 238 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SLC30A2Q9BRI3 323 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 BTBD1Q9H0C5 482 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 C1orf21Q9H246 121 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ITM2CQ9NQX7 267 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 POMPQ9Y244 141 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 UBIAD1Q9Y5Z9 338 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TCHHQ07283 1943 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SMIM28A0A1B0GU29 152 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 M0QX08 132 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 DLDP09622 509 aaKnown RBP10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CCNHP51946 323 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CCINQ13939 588 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CNPY1Q3B7I2 92 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ALDH16A1Q8IZ83 802 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 AQP11Q8NBQ7 271 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 FAM46DQ8NEK8 389 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 OR7G2Q8NG99 324 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TM9SF4Q92544 642 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 PSMG2Q969U7 264 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ABCB8Q9NUT2 735 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 HAO2Q9NYQ3 351 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 COPZ2Q9P299 210 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 FAM237AA0A1B0GTK4 181 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SMIM35A0A1B0GVV1 85 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 CIB4A0PJX0 185 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 SMIM30A4D0T7 59 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 DIRAS3O95661 229 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ADH6P28332 368 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF84P51523 738 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 NTRK2Q16620 822 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms