RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ERVK-11Q9UQG0 969 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ARSAP15289 507 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 GRB7Q14451 532 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 MPP7Q5T2T1 576 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 HTR3DQ70Z44 454 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ADGRG6Q86SQ4 1221 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 MCEMP1Q8IX19 187 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 LINC01465Q8N7H1 131 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 OR52B6Q8NGF0 335 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 NPIPB15A6NHN6 443 aaPredicted RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 WASH4PA8MWX3 477 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 PRKAR1AP10644 381 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 EN2P19622 333 aaPredicted RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 PON2Q15165 354 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ADGRD2Q7Z7M1 963 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ISCA2Q86U28 154 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 OR10H4Q8NGA5 316 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 OR10Q1Q8NGQ4 319 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 RAB2BQ8WUD1 216 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 TRMT2BQ96GJ1 504 aaKnown RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 TIMMDC1Q9NPL8 285 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 NENFQ9UMX5 172 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ELOA3DA6NLF2 546 aaPredicted RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 MAN2B1O00754 1011 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 XKP51811 444 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 NRG3P56975 720 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 OR4D1Q15615 310 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ELOA3BQ3SY89 546 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 NUP54Q7Z3B4 507 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 Q8N9G6 341 aaPredicted RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ELOA3Q8NG57 546 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 EFHD2Q96C19 240 aaPredicted RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 POLR2J2Q9GZM3 115 aaKnown RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 Q9N2J8 555 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 TMEM138Q9NPI0 162 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 CFL2Q9Y281 166 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 POFUT2Q9Y2G5 429 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 COQ9O75208 318 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 HOXD8P13378 290 aaPredicted RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 HSD3B1P14060 373 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 HSD3B2P26439 372 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 RPL6Q02878 288 aaKnown RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 SATL1Q86VE3 508 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 IPCEF1Q8WWN9 437 aaPredicted RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 JSRP1Q96MG2 331 aaPredicted RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 SLC17A9Q9BYT1 436 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 OR1A2Q9Y585 309 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 LRP5O75197 1615 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ZNF860A6NHJ4 632 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 HIDE1A8MVS5 230 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 BCKDHAP12694 445 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 GRIK2Q13002 908 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 LIN54Q6MZP7 749 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 PLET1Q6UQ28 207 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 PDPRQ8NCN5 879 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 SHKBP1Q8TBC3 707 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 DIRAS2Q96HU8 199 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 HSH2DQ96JZ2 352 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 IL4I1Q96RQ9 567 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 CDCA3Q99618 268 aaPredicted RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 MCUBQ9NWR8 336 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 RIMKLBQ9ULI2 386 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 CA14Q9ULX7 337 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 SESN1Q9Y6P5 492 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 NRAPQ86VF7 1730 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 TNRC6CQ9HCJ0 1690 aaKnown RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 KLHL33A6NCF5 533 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 C9P02748 559 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 GSTM3P21266 225 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ATCAYQ86WG3 371 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 TP53INP1Q96A56 240 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 KCNN2Q9H2S1 579 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 PTGDR2Q9Y5Y4 395 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 DIRAS1O95057 198 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ASGR2P07307 311 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 TBPL1P62380 186 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 DOC2AQ14183 400 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 UAP1L1Q3KQV9 507 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ALKBH2Q6NS38 261 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 TMEM173Q86WV6 379 aaPredicted RBP14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ZFAND4Q86XD8 727 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 SIX5Q8N196 739 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 LINC00471Q8N535 108 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ZNF527Q8NB42 609 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 RIT1Q92963 219 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ZUFSPQ96AP4 578 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 KCNH6Q9H252 994 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 MEAF6Q9HAF1 191 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 ABCB9Q9NP78 766 aa14.88□□□□□ -0.03
TIMP3-201ENST00000266085 TLX3O43711 291 aaPredicted RBP14.87□□□□□ -0.03
TIMP3-201ENST00000266085 CBFA2T3O75081 653 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 FMO3P31513 532 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 MAGEA6P43360 314 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 ELOCQ15369 112 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 REEP3Q6NUK4 255 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 PIANPQ8IYJ0 282 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 CPXM2Q8N436 756 aa14.87□□□□□ -0.03
TIMP3-201ENST00000266085 JPH3Q8WXH2 748 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms