RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HERC3Q15034 1050 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 PCOLCEQ15113 449 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 NXPE4Q6UWF7 544 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 ZDHHC24Q6UX98 284 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 LINC00696Q6ZRV3 163 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 RIPOR1Q6ZS17 1223 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 NT5CQ8TCD5 201 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 RHBDF1Q96CC6 855 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 GPR22Q99680 433 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 RBBP8Q99708 897 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 BARD1Q99728 777 aaKnown RBP15.19■□□□□ 0.02
USE1-201ENST00000263897 AIF1LQ9BQI0 150 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 TUBB6Q9BUF5 446 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 SLC29A3Q9BZD2 475 aa15.19■□□□□ 0.02
USE1-201ENST00000263897 OR2W5A6NFC9 320 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 GALR3O60755 368 aaPredicted RBP15.18■□□□□ 0.02
USE1-201ENST00000263897 RDH16O75452 317 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 WFS1O76024 890 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 SERPIND1P05546 499 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 CCDC166P0CW27 439 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 ALOX12P18054 663 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 IL10P22301 178 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 SOX11P35716 441 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 GP5P40197 560 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 GDF5P43026 501 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 REEP5Q00765 189 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 RGS1Q08116 209 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 TGFBIQ15582 683 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 C18orf21Q32NC0 220 aaPredicted RBP15.18■□□□□ 0.02
USE1-201ENST00000263897 MINDY4Q4G0A6 757 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 MFSD4BQ5TF39 518 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 FRA10AC1Q70Z53 315 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 CPEB2Q7Z5Q1 589 aaKnown RBP15.18■□□□□ 0.02
USE1-201ENST00000263897 CCDC25Q86WR0 208 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 CTAGE3PQ8IX95 158 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 KLHDC8AQ8IYD2 350 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 SPATA6LQ8N4H0 392 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 ANKRD53Q8N9V6 530 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 TRPV3Q8NET8 790 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 BRIX1Q8TDN6 353 aaKnown RBP15.18■□□□□ 0.02
USE1-201ENST00000263897 UNKQ9C0B0 810 aaKnown RBP15.18■□□□□ 0.02
USE1-201ENST00000263897 LRRC4CQ9HCJ2 640 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 PTGFRNQ9P2B2 879 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 RELNP78509 3460 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 POLEQ07864 2286 aa15.18■□□□□ 0.02
USE1-201ENST00000263897 CTAGE15A4D2H0 777 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 PHGDHO43175 533 aaKnown RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 DNAJB6O75190 326 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 H2AFYO75367 372 aaKnown RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 CBX6O95503 412 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 CELA2AP08217 269 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 C1GALT1C1LP0DN25 315 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 STMN1P16949 149 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 GNAZP19086 355 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 SPRP35270 261 aaPredicted RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 TSFMP43897 325 aaKnown RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 SLC6A12P48065 614 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 AP2B1P63010 937 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 GUCY2DQ02846 1103 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 MRPL49Q13405 166 aaKnown RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 ZNF169Q14929 603 aaPredicted RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 RBBP5Q15291 538 aaKnown RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 TLR1Q15399 786 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 EIF2S3LQ2VIR3 472 aaKnown RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 KBTBD12Q3ZCT8 623 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 DEFB134Q4QY38 66 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 CDKL4Q5MAI5 379 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 FHL5Q5TD97 284 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 NIPAL1Q6NVV3 410 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 LANCL3Q6ZV70 420 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 CTAGE6Q86UF2 777 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 GPSM1Q86YR5 675 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 SIRT6Q8N6T7 355 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 AMER2Q8N7J2 671 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 PLPP5Q8NEB5 264 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 CATSPER1Q8NEC5 780 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 HAS2Q92819 552 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 PEX11GQ96HA9 241 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 CNDP1Q96KN2 507 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 UBXN10Q96LJ8 280 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 OR1F2PQ96R84 312 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 C19orf25Q9UFG5 118 aaPredicted RBP15.17■□□□□ 0.02
USE1-201ENST00000263897 NTNG1Q9Y2I2 539 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 SVILO95425 2214 aa15.17■□□□□ 0.02
USE1-201ENST00000263897 IGHV3-20A0A0C4DH32 117 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ZNF860A6NHJ4 632 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 TAPBPO15533 448 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 CHST10O43529 356 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 WDR47O94967 919 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 B3GALT4O96024 378 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ZNF888P0CJ79 500 aaPredicted RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 SMIM10L1P0DMW3 83 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ITGAMP11215 1152 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 CD1DP15813 335 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 GGT5P36269 586 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 AGTR2P50052 363 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms