RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GRIA2P42262 883 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ACADVLP49748 655 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 RPS6KA3P51812 740 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 HTRA4P83105 476 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 CAMK1Q14012 370 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 CCSMST1Q4G0I0 132 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 CTSL3PQ5NE16 218 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 CLEC12AQ5QGZ9 265 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 GCNT6Q5T4J0 391 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF776Q68DI1 518 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 POMZP3Q6PJE2 187 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 WDR48Q8TAF3 677 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 TMEM203Q969S6 136 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 HSH2DQ96JZ2 352 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 LMLNQ96KR4 655 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 PRAP1Q96NZ9 151 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 COL21A1Q96P44 957 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ZSCAN5AQ9BUG6 496 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 C1QTNF7Q9BXJ2 289 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 BTBD1Q9H0C5 482 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 PDFQ9HBH1 243 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 SOHLH2Q9NX45 425 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 NBASA2RRP1 2371 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 A0A1W2PRB8 838 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 SLC16A8O95907 504 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 C1SP09871 688 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 IDSP22304 550 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 POLR2IP36954 125 aaKnown RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 SLC26A3P40879 764 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 CDK9P50750 372 aaKnown RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 RPS3AP61247 264 aaKnown RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 TUBB3Q13509 450 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF77Q15935 545 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 RNASE12Q5GAN4 147 aaKnown RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 RSBN1Q5VWQ0 802 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 NFKBIDQ8NI38 313 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 LCN9Q8WX39 176 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 USP7Q93009 1102 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF707Q96C28 371 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 OTUB2Q96DC9 234 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF641Q96N77 438 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 ZCCHC3Q9NUD5 404 aaKnown RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 MAT2BQ9NZL9 334 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 M0R129 80 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 NUDT14O95848 222 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MYL12AP19105 171 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MAP2K4P45985 399 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MYBPC1Q00872 1141 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TAB1Q15750 504 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 NPTX1Q15818 432 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 OR52E8Q6IFG1 317 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 RNF44Q7L0R7 432 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TDHQ8IZJ6 230 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 DNAJC5GQ8N7S2 189 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 RANBP9Q96S59 729 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ARNT2Q9HBZ2 717 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 GPRC5BQ9NZH0 403 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 PLEKHM1Q9Y4G2 1056 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 KPNA4O00629 521 aaPredicted RBP11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MED26O95402 600 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 RPN2P04844 631 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TTKP33981 857 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ID2Q02363 134 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TFF2Q03403 129 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 HYAL1Q12794 435 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 LRP8Q14114 963 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 SMARCD3Q6STE5 483 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF683Q8IZ20 524 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 CPXM2Q8N436 756 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 PLA2G15Q8NCC3 412 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MRPL38Q96DV4 380 aaKnown RBP11.63□□□□□ -0.55
CHPF2-201ENST00000035307 NRTNQ99748 197 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 AIF1LQ9BQI0 150 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 COPS4Q9BT78 406 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TRIM39Q9HCM9 518 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 DLGAP4Q9Y2H0 992 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 PCDHGB5Q9Y5G0 923 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF860A6NHJ4 632 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MAGEB3O15480 346 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 CH25HO95992 272 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 B3GALT4O96024 378 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ENO2P09104 434 aaPredicted RBP11.63□□□□□ -0.55
CHPF2-201ENST00000035307 PRPS1L1P21108 318 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TACR1P25103 407 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
CHPF2-201ENST00000035307 DOC2AQ14183 400 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 ANXA8L1Q5VT79 327 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 TRIM69Q86WT6 500 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 STON2Q8WXE9 905 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 RAD51AP1Q96B01 352 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 BRINP2Q9C0B6 783 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 SDR39U1Q9NRG7 319 aaPredicted RBP11.63□□□□□ -0.55
CHPF2-201ENST00000035307 MALT1Q9UDY8 824 aa11.63□□□□□ -0.55
CHPF2-201ENST00000035307 FEZF1A0PJY2 475 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 DYTNA2CJ06 578 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 MROH6A6NGR9 719 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
CHPF2-201ENST00000035307 A8MU76 341 aa11.62□□□□□ -0.55
CHPF2-201ENST00000035307 KRT75O95678 551 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms