RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TIA1P31483 386 aaKnown RBP eCLIP7.78□□□□□ -1.163e-6■■■■□ 19.8
GPC3-204ENST00000631057 BDKRB1P46663 353 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 CLK3P49761 638 aaKnown RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 BMXP51813 675 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 EPHA5P54756 1037 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 GP2P55259 537 aaKnown RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 RAE1P78406 368 aaKnown RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 VLDLRP98155 873 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 IL1RL1Q01638 556 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 MVKQ03426 396 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 OCA2Q04671 838 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 TEAD4Q15561 434 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 ZNF805Q5CZA5 627 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 ARSIQ5FYB1 569 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 FAHD1Q6P587 224 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 GALNT18Q6P9A2 607 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 LINC00299Q6ZSB3 139 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 SLC16A12Q6ZSM3 486 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 TECPR1Q7Z6L1 1165 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 VTCN1Q7Z7D3 282 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 KIAA0907Q7Z7F0 614 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 B3GNT8Q7Z7M8 397 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 TSPYL5Q86VY4 417 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 CLECL1Q8IZS7 167 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 PARP8Q8N3A8 854 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 RNF175Q8N4F7 328 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 C1orf52Q8N6N3 182 aaKnown RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 RASGEF1AQ8N9B8 481 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 TTC29Q8NA56 475 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 ATG16L2Q8NAA4 619 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 FBXO15Q8NCQ5 510 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 C11orf65Q8NCR3 313 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 OR7G3Q8NG95 312 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 CNIH3Q8TBE1 160 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 GIPC3Q8TF64 312 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 CHTF18Q8WVB6 975 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 FAR1Q8WVX9 515 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 SH3KBP1Q96B97 665 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 COQ8BQ96D53 544 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 C11orf24Q96F05 449 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 LRIG1Q96JA1 1093 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 CSF3RQ99062 836 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 EPYCQ99645 322 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 PITX2Q99697 317 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 CHST8Q9H2A9 424 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 DUSP21Q9H596 190 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 EPHX3Q9H6B9 360 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 KRT84Q9NSB2 600 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 TDP1Q9NUW8 608 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 EXD2Q9NVH0 621 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 RHBDL2Q9NX52 303 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 PDP1Q9P0J1 537 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 FAM8A1Q9UBU6 413 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 ZNF282Q9UDV7 671 aaPredicted RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 IL36AQ9UHA7 158 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 NDRG4Q9ULP0 352 aaKnown RBP7.78□□□□□ -1.16
GPC3-204ENST00000631057 B3GNT3Q9Y2A9 372 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 ATP11BQ9Y2G3 1177 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 DENND4AQ7Z401 1863 aa7.78□□□□□ -1.16
GPC3-204ENST00000631057 GNG14A0A1W2PPG7 69 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 C1orf226A1L170 272 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 TMEM202A6NGA9 273 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 SOBPA7XYQ1 873 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 GABRR3A8MPY1 467 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 TTC34A8MYJ7 566 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 RNASET2O00584 256 aaKnown RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 ZNF197O14709 1029 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 SLC22A1O15245 554 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 SUV39H1O43463 412 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 RGS10O43665 173 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 NDUFB5O43674 189 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 XPNPEP2O43895 674 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 FAM20BO75063 409 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 BCAS1O75363 584 aaPredicted RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 INMTO95050 263 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 GABARAPO95166 117 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 ZBTB11O95625 1053 aaPredicted RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 SRPRAP08240 638 aaKnown RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 CLTBP09497 229 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 ELFN1P0C7U0 828 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 CYP4B1P13584 511 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 PTPN2P17706 415 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 IDSP22304 550 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 IMPA1P29218 277 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 FMO3P31513 532 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 RPL3P39023 403 aaKnown RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 MMP12P39900 470 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 CCR2P41597 374 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 PREPP48147 710 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 CTSCP53634 463 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 CSNK2BP67870 215 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 SLC35A2P78381 396 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 PHEXP78562 749 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 EMX1Q04741 257 aaPredicted RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 PIGFQ07326 219 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 SIM2Q14190 667 aaPredicted RBP7.77□□□□□ -1.17
GPC3-204ENST00000631057 E2F2Q14209 437 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 ZNF846Q147U1 533 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 SPCS2Q15005 226 aa7.77□□□□□ -1.17
GPC3-204ENST00000631057 MAD2L1BPQ15013 274 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms