RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 WASH2PQ6VEQ5 465 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 NSMFQ6X4W1 530 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 LIX1Q8N485 282 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 DPCDQ9BVM2 203 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 TMEM39BQ9GZU3 492 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZNF490Q9ULM2 529 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 CLEC11AQ9Y240 323 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 B3GAT3O94766 335 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 CD48P09326 243 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 GIMD1P0DJR0 217 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 TAP2Q03519 686 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 BST1Q10588 318 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 TTLL4Q14679 1199 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 MED27Q6P2C8 311 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ABHD11Q8NFV4 315 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZNF675Q8TD23 568 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 COL26A1Q96A83 441 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 OR2M2Q96R28 347 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 LGMNQ99538 433 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 POLD4Q9HCU8 107 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 NIT2Q9NQR4 276 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZIM2Q9NZV7 527 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 SLC17A7Q9P2U7 560 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZNF282Q9UDV7 671 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 TMED3Q9Y3Q3 217 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 MOXD2PA6NHM9 499 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 PHKG2P15735 406 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 PTPN3P26045 913 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 WASP42768 502 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 LIMK2P53671 638 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 AGAP6Q5VW22 663 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 OR2L3Q8NG85 312 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 CD200R1Q8TD46 325 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 PSMF1Q92530 271 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZNF514Q96K75 400 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 AGAP4Q96P64 663 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 POPDC2Q9HBU9 364 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 RNF6Q9Y252 685 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 EXOSC1Q9Y3B2 195 aaKnown RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 AKAP12Q02952 1782 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 OR7A17O14581 309 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 SYT7O43581 403 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 STK16O75716 305 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 KITLGP21583 273 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 HMGA2P52926 109 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 CHRNA6Q15825 494 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 TMEM135Q86UB9 458 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZNF34Q8IZ26 560 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 NSMAFQ92636 917 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 SLC19A3Q9BZV2 496 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 TMEM184CQ9NVA4 438 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 KDM4BO94953 1096 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 AKR1B1P15121 316 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 LSM3P62310 102 aaKnown RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 MEF2AQ02078 507 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 NAA40Q86UY6 237 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 PPCDCQ96CD2 204 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 AKT3Q9Y243 479 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 PPP2R3BQ9Y5P8 575 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 CASC3O15234 703 aaKnown RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 ADAMTS4O75173 837 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 GPC1P35052 558 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 EMX1Q04741 257 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 LIPJQ5W064 366 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 GSG1LQ6UXU4 331 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 NAT8LQ8N9F0 302 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 TGM7Q96PF1 710 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 RBM7Q9Y580 266 aaKnown RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 TRABD2BA6NFA1 517 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ERCC1P07992 297 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 STAG3L1P0CL83 205 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 PTTG1IPP53801 180 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 CLDN8P56748 225 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 DNASE1L3Q13609 305 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ADAM5Q6NVV9 412 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 USP17L6PQ6QN14 398 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 ZNF614Q8N883 585 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 C11orf24Q96F05 449 aaPredicted RBP3.3□□□□□ -1.88
NEB-218ENST00000603639 SLC39A8Q9C0K1 460 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 SLC7A5P2Q9GIP4 190 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 TMEM131LA2VDJ0 1609 aa3.3□□□□□ -1.88
NEB-218ENST00000603639 METTL15A6NJ78 407 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 SNRPGP15A8MWD9 76 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 NFICP08651 508 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 USP17L8P0C7I0 530 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 METTL15P1P0C7V9 234 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 RFX2P48378 723 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 PNLIPRP1P54315 467 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 CACNB1Q02641 598 aaPredicted RBP3.29□□□□□ -1.88
NEB-218ENST00000603639 MFSD10Q14728 455 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 RNF130Q86XS8 419 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 PYROXD2Q8N2H3 581 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 ARNTL2Q8WYA1 636 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 YIPF5Q969M3 257 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 HSPBAP1Q96EW2 488 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 ZNF419Q96HQ0 510 aaPredicted RBP3.29□□□□□ -1.88
NEB-218ENST00000603639 TIMM29Q9BSF4 260 aa3.29□□□□□ -1.88
NEB-218ENST00000603639 RYDENQ9NUL5 291 aaKnown RBP3.29□□□□□ -1.88
NEB-218ENST00000603639 ZNF726A6NNF4 738 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms