RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 UMODP07911 640 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 FAM87AP0C7U9 286 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 GNAZP19086 355 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 AHRP35869 848 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 MSH2P43246 934 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 CDC16Q13042 620 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 KCNAB2Q13303 367 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 PWP1Q13610 501 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 SLC9A5Q14940 896 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 ACAP2Q15057 778 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 CATSPEREQ5SY80 951 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 TMEM214Q6NUQ4 689 aaKnown RBP15.38■□□□□ 0.05
LSM4-206ENST00000600289 NXPE4Q6UWF7 544 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 ASPGQ86U10 573 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 UBTD2Q8WUN7 234 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.38■□□□□ 0.05
LSM4-206ENST00000600289 MRRFQ96E11 262 aaKnown RBP15.38■□□□□ 0.05
LSM4-206ENST00000600289 PITHD1Q9GZP4 211 aaPredicted RBP15.38■□□□□ 0.05
LSM4-206ENST00000600289 DRC3Q9H069 523 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 EHD1Q9H4M9 534 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 ALG9Q9H6U8 611 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 WWOXQ9NZC7 414 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 TLK1Q9UKI8 766 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 PTRH2Q9Y3E5 179 aaKnown RBP15.38■□□□□ 0.05
LSM4-206ENST00000600289 EXOC1LA0A1B0GW35 172 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 FEZF1A0PJY2 475 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 NCF1BA6NI72 391 aaPredicted RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 SYCE1LA8MT33 242 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 NCF1CA8MVU1 366 aaPredicted RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 H0YIG0 161 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 FOXS1O43638 330 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 NSA2O95478 260 aaKnown RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 S100BP04271 92 aaPredicted RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 FAM153BP0C7A2 387 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 SLC35G6P0C7Q6 338 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 NCF1P14598 390 aaPredicted RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 FBLP22087 321 aaKnown RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 GSTM2P28161 218 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 TYK2P29597 1187 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 GMPRP36959 345 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 SCTRP47872 440 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 OR1D4P47884 311 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 KCNC1P48547 511 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 IRF9Q00978 393 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 E2F2Q14209 437 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 FAM153CQ494X1 144 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 TEX35Q5T0J7 233 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 ATG9BQ674R7 924 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 LRRC70Q7Z2Q7 622 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 TMPRSS11BQ86T26 416 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 DTWD1Q8N5C7 304 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 NT5CQ8TCD5 201 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 KCTD4Q8WVF5 259 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 NXNL1Q96CM4 212 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 WDR34Q96EX3 536 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 SEC16BQ96JE7 1060 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 TSNARE1Q96NA8 513 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 GPR78Q96P69 363 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 AIF1LQ9BQI0 150 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 TGIF2Q9GZN2 237 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 EPB41L4BQ9H329 900 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 DNAJC11Q9NVH1 559 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 CD274Q9NZQ7 290 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 ZNF282Q9UDV7 671 aaPredicted RBP15.37■□□□□ 0.05
LSM4-206ENST00000600289 ZFP69BQ9UJL9 534 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 SLC22A7Q9Y694 548 aa15.37■□□□□ 0.05
LSM4-206ENST00000600289 BLACEA4D250 179 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 POC1B-GALNT4F8VUJ3 575 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 OR1F1O43749 312 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 KLK8O60259 260 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 RFPL1O75677 317 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 STK16O75716 305 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 IGHEP01854 428 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 C1GALT1C1LP0DN25 315 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 COL6A2P12110 1019 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 CXCR2P25025 360 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 GCAP28676 217 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 PCDH1Q08174 1060 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 C18orf21Q32NC0 220 aaPredicted RBP15.36■□□□□ 0.05
LSM4-206ENST00000600289 FAM69BQ5VUD6 431 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 KLC3Q6P597 504 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 ADGRD1Q6QNK2 874 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 SLCO4C1Q6ZQN7 724 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 MED25Q71SY5 747 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 MRGPREQ86SM8 312 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 AFAP1L2Q8N4X5 818 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 METTL27Q8N6F8 245 aaPredicted RBP15.36■□□□□ 0.05
LSM4-206ENST00000600289 AMER3Q8N944 861 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 TMEM102Q8N9M5 508 aaPredicted RBP15.36■□□□□ 0.05
LSM4-206ENST00000600289 SLC13A3Q8WWT9 602 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 MTBPQ96DY7 904 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 CD244Q9BZW8 370 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 SPNS1Q9H2V7 528 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 NT5DC2Q9H857 520 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 C14orf105Q9NVL8 296 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 CTSFQ9UBX1 484 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 MAP4K5Q9Y4K4 846 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 MAU2Q9Y6X3 613 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 CENPEQ02224 2701 aa15.36■□□□□ 0.05
LSM4-206ENST00000600289 CRYBG3Q68DQ2 2970 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms