RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 WBP1Q96G27 269 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 SLC26A1Q9H2B4 701 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 ANKHQ9HCJ1 492 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 C14orf105Q9NVL8 296 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 XPR1Q9UBH6 696 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 ZNF282Q9UDV7 671 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 MAN2B2Q9Y2E5 1009 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 PTRH2Q9Y3E5 179 aaKnown RBP11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 SCN3AQ9NY46 2000 aa11.48□□□□□ -0.57
ARHGEF1-216ENST00000598587 SEC16AO15027 2179 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SMIM23A6NLE4 172 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 H0YIG0 161 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 MAP2K7O14733 419 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 NKX2-8O15522 239 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 KLK8O60259 260 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 RFPL1O75677 317 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 NSA2O95478 260 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 ONECUT2O95948 504 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 IGHEP01854 428 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SHBGP04278 402 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SERPIND1P05546 499 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 CAPN1P07384 714 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 NUDT17P0C025 328 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 MTHFD2P13995 350 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SERPINB1P30740 379 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 CCR10P46092 362 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SCTRP47872 440 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 STXBP1P61764 594 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 CYP4F2P78329 520 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 IRF8Q02556 426 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SLBPQ14493 270 aaKnown RBP eCLIP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SSPNQ14714 243 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 TBCCQ15814 346 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 FBXO48Q5FWF7 155 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 LCN10Q6JVE6 187 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 TMEM214Q6NUQ4 689 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 TMIGD1Q6UXZ0 262 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SLCO4C1Q6ZQN7 724 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 VN1R4Q7Z5H5 301 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 PLD6Q8N2A8 252 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 METTL27Q8N6F8 245 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 OR2Y1Q8NGV0 311 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 NT5CQ8TCD5 201 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 APOBEC4Q8WW27 367 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 NACC2Q96BF6 587 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 TM4SF19Q96DZ7 209 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 GPR78Q96P69 363 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 PARD6BQ9BYG5 372 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 NT5DC2Q9H857 520 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 MKKSQ9NPJ1 570 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 DCDC2Q9UHG0 476 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 SLC22A7Q9Y694 548 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 MAU2Q9Y6X3 613 aa11.47□□□□□ -0.57
ARHGEF1-216ENST00000598587 A0A088AWK7 358 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 EIF4E1BA6NMX2 242 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 STX16-NPEPL1H3BU86 382 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 TK2O00142 265 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 STX16O14662 325 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 LCMT2O60294 686 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 GLRA3O75311 464 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ERLIN1O75477 346 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 SFTPCP11686 197 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ZNF10P21506 573 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 VARSP26640 1264 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ARL1P40616 181 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 SLCO1A2P46721 670 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 OR1D4P47884 311 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 KCNC1P48547 511 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 RRADP55042 308 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 PHEXP78562 749 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 CHIT1Q13231 466 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 PCBP2Q15366 365 aaKnown RBP eCLIP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 DEFB109BQ30KR1 87 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 MREGQ8N565 214 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 TEX9Q8N6V9 391 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 PTGR2Q8N8N7 351 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ZNF740Q8NDX6 193 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ZCCHC10Q8TBK6 192 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 EPS8L3Q8TE67 593 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 CCT6BQ92526 530 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 EXTL1Q92935 676 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ESAMQ96AP7 390 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 MIEF2Q96C03 454 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 REPS1Q96D71 796 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 WDR34Q96EX3 536 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 RUFY1Q96T51 708 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ROPN1BQ9BZX4 212 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 GEMIN8Q9NWZ8 242 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 COPG2Q9UBF2 871 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 TRPC4Q9UBN4 977 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 RAB21Q9UL25 225 aa11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 G3BP2Q9UN86 482 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-216ENST00000598587 A0A0A6YYC8 382 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms