RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 HERC3Q15034 1050 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 TRADDQ15628 312 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 TSNQ15631 228 aaKnown RBP9.96□□□□□ -0.82
CCDC9-203ENST00000596938 SYT16Q17RD7 645 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 CDKL4Q5MAI5 379 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 CATSPEREQ5SY80 951 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 GRTP1Q5TC63 336 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 NIPAL1Q6NVV3 410 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 NXPE4Q6UWF7 544 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 ZDHHC24Q6UX98 284 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 CAPN12Q6ZSI9 719 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 THOC6Q86W42 341 aaKnown RBP9.96□□□□□ -0.82
CCDC9-203ENST00000596938 KBTBD2Q8IY47 623 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 KLHDC8AQ8IYD2 350 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 AFAP1L2Q8N4X5 818 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 KCT2Q8NC54 265 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 OR51Q1Q8NH59 317 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 SLC5A11Q8WWX8 675 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 PSMF1Q92530 271 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 C8orf44Q96CB5 159 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 THOC3Q96J01 351 aaKnown RBP9.96□□□□□ -0.82
CCDC9-203ENST00000596938 UBXN10Q96LJ8 280 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 CYTH2Q99418 400 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 GPR22Q99680 433 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 RBBP8Q99708 897 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 MESP1Q9BRJ9 268 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF700Q9H0M5 742 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 PELI2Q9HAT8 420 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 CLK4Q9HAZ1 481 aaKnown RBP9.96□□□□□ -0.82
CCDC9-203ENST00000596938 ANKHQ9HCJ1 492 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 LRRC4CQ9HCJ2 640 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 ZFP69BQ9UJL9 534 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 MKL2Q9ULH7 1088 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 SLC22A14Q9Y267 594 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 SGK494L7N484 410 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 ALOX12BO75342 701 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 STATHP02808 62 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 SERPINA7P05543 415 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 PRR35P0CG20 571 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 STMN1P16949 149 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 GNAZP19086 355 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 SPRP35270 261 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 GGT5P36269 586 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 ATP6V0D1P61421 351 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 AP2B1P63010 937 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 MEF2AQ02078 507 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 CKAP4Q07065 602 aaKnown RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 TGFBIQ15582 683 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 ZKSCAN8Q15776 578 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 ISLR2Q6UXK2 745 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 RIPOR1Q6ZS17 1223 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 PRSS41Q7RTY9 318 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 PDSS2Q86YH6 399 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 IQCKQ8N0W5 287 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF740Q8NDX6 193 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 TRPV3Q8NET8 790 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 NT5CQ8TCD5 201 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 PPP4R1Q8TF05 950 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 METTL21AQ8WXB1 218 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 RHBDF1Q96CC6 855 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 SNRNP40Q96DI7 357 aaKnown RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 MOCOSQ96EN8 888 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 IMMP1LQ96LU5 166 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 BARD1Q99728 777 aaKnown RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 EGFL8Q99944 293 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 WDR77Q9BQA1 342 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 AIF1LQ9BQI0 150 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 CAPS2Q9BXY5 557 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 VN1R1Q9GZP7 353 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 CAB39LQ9H9S4 337 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 RIC8BQ9NVN3 520 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 NAALAD2Q9Y3Q0 740 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 DYRK1BQ9Y463 629 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 SNRNP200O75643 2136 aaKnown RBP9.95□□□□□ -0.82
CCDC9-203ENST00000596938 MED13Q9UHV7 2174 aa9.95□□□□□ -0.82
CCDC9-203ENST00000596938 FER1L5A0AVI2 2057 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 NPEPPSL1A6NEC2 478 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 NDUFS4O43181 175 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 GALR3O60755 368 aaPredicted RBP9.94□□□□□ -0.82
CCDC9-203ENST00000596938 H2AFYO75367 372 aaKnown RBP9.94□□□□□ -0.82
CCDC9-203ENST00000596938 JRKO75564 520 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 KLHL18O94889 574 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 TUBB4AP04350 444 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 CCDC166P0CW27 439 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 C8orf89P0DMQ9 161 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 SMIM10L1P0DMW3 83 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 C1GALT1C1LP0DN25 315 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 CD1DP15813 335 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 ALOX12P18054 663 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 IL1RNP18510 177 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 STX2P32856 288 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 XCR1P46094 333 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 SLC6A12P48065 614 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 EFNA3P52797 238 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 RAB10P61026 200 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 SKP1P63208 163 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 REEP5Q00765 189 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 RGS1Q08116 209 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 MFAP5Q13361 173 aa9.94□□□□□ -0.82
CCDC9-203ENST00000596938 NAB1Q13506 487 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms