RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PCDHGA8Q9Y5G5 932 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 LRRC37A2A6NM11 1700 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 ALPK2Q86TB3 2170 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 GABRR3A8MPY1 467 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 LATS1O95835 1130 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CD72P21854 359 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 SHMT2P34897 504 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CTSKP43235 329 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PDGFRLQ15198 375 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CMPK2Q5EBM0 449 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 MPP7Q5T2T1 576 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 COMMD6Q7Z4G1 85 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 NPAS3Q8IXF0 933 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 AADATQ8N5Z0 425 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PROX1Q92786 737 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 RAD21L1Q9H4I0 556 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PTTG2Q9NZH5 202 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 BCHEP06276 602 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PIM1P11309 404 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 ADRB3P13945 408 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 AMD1P17707 334 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 SLC5A2P31639 672 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 C21orf59P57076 290 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PHC1P78364 1004 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 ABHD18Q0P651 414 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 SLC14A1Q13336 389 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 VMACQ2NL98 169 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 C5orf22Q49AR2 442 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 FAM78AQ5JUQ0 283 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 TRAM1L1Q8N609 369 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PLA2G15Q8NCC3 412 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 OR9A1PQ8NGU1 263 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CHFRQ96EP1 664 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 EPB41L1Q9H4G0 881 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CARS2Q9HA77 564 aaKnown RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 RC3H2Q9HBD1 1191 aaKnown RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 C11orf16Q9NQ32 467 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 THUMPD1Q9NXG2 353 aaKnown RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 BTBD3Q9Y2F9 522 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 RASGRP1O95267 797 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ETHE1O95571 254 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 IGHA2P01877 340 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 PIGAP37287 484 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 FEN1P39748 380 aaKnown RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CSNK1DP48730 415 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ID2Q02363 134 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CD47Q08722 323 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 MED22Q15528 200 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 TRIM40Q6P9F5 258 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 KLHDC8BQ8IXV7 354 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 C10orf111Q8N326 155 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CBARPQ8N350 705 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 OR4E2Q8NGC2 313 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 SLC5A11Q8WWX8 675 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 PDLIM5Q96HC4 596 aaKnown RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CEP19Q96LK0 163 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 NTMT1Q9BV86 223 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 EPS8L2Q9H6S3 715 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 WDR26Q9H7D7 661 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 FBXO10Q9UK96 956 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 MYO16Q9Y6X6 1858 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF860A6NHJ4 632 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 WASHC1A8K0Z3 465 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 MAGEB3O15480 346 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF821O75541 412 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 APOL3O95236 402 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 KAT7O95251 611 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 IMPA1P29218 277 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 DCTP40126 519 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 UBE3AQ05086 875 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 RAPSNQ13702 412 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 WASH2PQ6VEQ5 465 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 MTSS1LQ765P7 747 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ERN2Q76MJ5 926 aaKnown RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 HIPK1Q86Z02 1210 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 DDHD1Q8NEL9 900 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 OR8J3Q8NGG0 315 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ISOC1Q96CN7 298 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CLIP3Q96DZ5 547 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 AIF1LQ9BQI0 150 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 SEZ6LQ9BYH1 1024 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF696Q9H7X3 374 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 TPRKBQ9Y3C4 175 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 VILLO15195 856 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 DNTTP04053 509 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ASMTP46597 345 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 PFN3P60673 137 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 SCARB2Q14108 478 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CCDC85BQ15834 202 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-217ENST00000584582 NKG7Q16617 165 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CYBRD1Q53TN4 286 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 GCNT6Q5T4J0 391 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 PPP2R2DQ66LE6 453 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 TANGO2Q6ICL3 276 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 CEACAM20Q6UY09 585 aa10.88□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF605Q86T29 641 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms