RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CD300AQ9UGN4 299 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 SAP18O00422 153 aaKnown RBP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 PRAMEF11O60813 436 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 SEC14L2O76054 403 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR6A2O95222 327 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 TLX1P31314 330 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 MNDAP41218 407 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 PPP3R1P63098 170 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 NOXRED1Q6NXP6 359 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 CADM3Q8N126 398 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 TTPALQ9BTX7 342 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR51V1Q9H2C8 321 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAT2BQ9NZL9 334 aa12.71□□□□□ -0.37
PCDHGB3-201ENST00000576222 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 PDPK1O15530 556 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 HAPLN1P10915 354 aaPredicted RBP12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 PIK3CBP42338 1070 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 NFE2L1Q14494 772 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 WDR45BQ5MNZ6 344 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 SNAP47Q5SQN1 464 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF598Q86UK7 904 aaKnown RBP12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 UMODL1-AS1Q8N2C9 162 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 CHCHD4Q8N4Q1 142 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 SNX33Q8WV41 574 aa12.71□□□□□ -0.38
PCDHGB3-201ENST00000576222 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 L7N2F9 121 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 DNTTP04053 509 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CXCR4P61073 352 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 EXOC3L2Q2M3D2 409 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 SMARCD3Q6STE5 483 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 GPRIN1Q7Z2K8 1008 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 VWA5B2Q8N398 1253 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 TBX5Q99593 518 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 DPH2Q9BQC3 489 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR51E2Q9H255 320 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 RHBGQ9H310 441 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF780BQ9Y6R6 833 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 RIIAD1A6NNX1 92 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ELFN1P0C7U0 828 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAP2K5Q13163 448 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 SPIN4Q56A73 249 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF691Q5VV52 312 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 C22orf42Q6IC83 251 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 FAM110BQ8TC76 370 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 MRPL17Q9NRX2 175 aaKnown RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 DCAF13Q9NV06 445 aaKnown RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 TMEM45AQ9NWC5 275 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZDHHC3Q9NYG2 299 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 KDM4FA0A1W2PPD8 638 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR14I1A6ND48 311 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 M0R233 179 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 STBD1O95210 358 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 SRPRAP08240 638 aaKnown RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 GSTM3P21266 225 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CLDN8P56748 225 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CYP27C1Q4G0S4 372 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC35G5Q96KT7 338 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 GORASP2Q9H8Y8 452 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 STARD7Q9NQZ5 370 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLAMF8Q9P0V8 285 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 MGAT4BQ9UQ53 548 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 RAB36O95755 333 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 TGFB1P01137 390 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 HLA-DQA2P01906 255 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 BCHEP06276 602 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ANXA3P12429 323 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 LAMP2P13473 410 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRKACBP22694 351 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CASP3P42574 277 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAGEA2P43356 314 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CCR4P51679 360 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 OLFML2AQ68BL7 652 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 PGBD2Q6P3X8 592 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ARL9Q6T311 187 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CNTN4Q8IWV2 1026 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 METTL4Q8N3J2 472 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF557Q8N988 423 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC22A17Q8WUG5 538 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CREB3L1Q96BA8 519 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZBED6CLQ96FA7 236 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 HYLS1Q96M11 299 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 TNFRSF10DQ9UBN6 386 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 CDH7Q9ULB5 785 aa12.7□□□□□ -0.38
PCDHGB3-201ENST00000576222 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 JUNBP17275 347 aaPredicted RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRDX3P30048 256 aaKnown RBP12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 DGKGP49619 791 aa12.69□□□□□ -0.38
PCDHGB3-201ENST00000576222 KCNC4Q03721 635 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms