RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SCAMP2O15127 329 aaKnown RBP15.08■□□□□ 0
NUP88-207ENST00000573584 OXSR1O95747 527 aaPredicted RBP15.08■□□□□ 0
NUP88-207ENST00000573584 MAGP20916 626 aa15.08■□□□□ 0
NUP88-207ENST00000573584 LHCGRP22888 699 aa15.08■□□□□ 0
NUP88-207ENST00000573584 GTF2E2P29084 291 aaKnown RBP15.08■□□□□ 0
NUP88-207ENST00000573584 GRK5P34947 590 aa15.08■□□□□ 0
NUP88-207ENST00000573584 SP140Q13342 867 aa15.08■□□□□ 0
NUP88-207ENST00000573584 ATAD3BQ5T9A4 648 aa15.08■□□□□ 0
NUP88-207ENST00000573584 SERPINA13PQ6UXR4 307 aa15.08■□□□□ 0
NUP88-207ENST00000573584 USP45Q70EL2 814 aa15.08■□□□□ 0
NUP88-207ENST00000573584 TSEN54Q7Z6J9 526 aaKnown RBP15.08■□□□□ 0
NUP88-207ENST00000573584 AKAP14Q86UN6 197 aa15.08■□□□□ 0
NUP88-207ENST00000573584 WDR20Q8TBZ3 569 aa15.08■□□□□ 0
NUP88-207ENST00000573584 CORO1BQ9BR76 489 aa15.08■□□□□ 0
NUP88-207ENST00000573584 RNF167Q9H6Y7 350 aa15.08■□□□□ 0
NUP88-207ENST00000573584 SPATA6Q9NWH7 488 aaPredicted RBP15.08■□□□□ 0
NUP88-207ENST00000573584 BACE2Q9Y5Z0 518 aa15.08■□□□□ 0
NUP88-207ENST00000573584 A3GALT2U3KPV4 340 aa15.08■□□□□ 0
NUP88-207ENST00000573584 A0A1W2PQ67 120 aa15.08■□□□□ 0
NUP88-207ENST00000573584 C1orf226A1L170 272 aa15.08■□□□□ 0
NUP88-207ENST00000573584 TMEM88BA6NKF7 163 aa15.08■□□□□ 0
NUP88-207ENST00000573584 ADAMDEC1O15204 470 aa15.08■□□□□ 0
NUP88-207ENST00000573584 SLC16A5O15375 505 aa15.08■□□□□ 0
NUP88-207ENST00000573584 TLL1O43897 1013 aa15.08■□□□□ 0
NUP88-207ENST00000573584 MTX2O75431 263 aa15.08■□□□□ 0
NUP88-207ENST00000573584 STSP08842 583 aa15.08■□□□□ 0
NUP88-207ENST00000573584 ATP1B2P14415 290 aaPredicted RBP15.08■□□□□ 0
NUP88-207ENST00000573584 TNFRSF1BP20333 461 aa15.08■□□□□ 0
NUP88-207ENST00000573584 SELENOWP63302 87 aa15.08■□□□□ 0
NUP88-207ENST00000573584 VEPH1Q14D04 833 aa15.08■□□□□ 0
NUP88-207ENST00000573584 ANGPTL8Q6UXH0 198 aa15.08■□□□□ 0
NUP88-207ENST00000573584 DNAJB7Q7Z6W7 309 aaPredicted RBP15.08■□□□□ 0
NUP88-207ENST00000573584 ZNF605Q86T29 641 aa15.08■□□□□ 0
NUP88-207ENST00000573584 STX19Q8N4C7 294 aa15.08■□□□□ 0
NUP88-207ENST00000573584 PARP16Q8N5Y8 322 aa15.08■□□□□ 0
NUP88-207ENST00000573584 C11orf65Q8NCR3 313 aa15.08■□□□□ 0
NUP88-207ENST00000573584 OR10G2Q8NGC3 310 aa15.08■□□□□ 0
NUP88-207ENST00000573584 TRMT2BQ96GJ1 504 aaKnown RBP15.08■□□□□ 0
NUP88-207ENST00000573584 TXNDC15Q96J42 360 aa15.08■□□□□ 0
NUP88-207ENST00000573584 MRPL9Q9BYD2 267 aaKnown RBP15.08■□□□□ 0
NUP88-207ENST00000573584 MIR1-1HGQ9H1L0 117 aa15.08■□□□□ 0
NUP88-207ENST00000573584 OR51E2Q9H255 320 aa15.08■□□□□ 0
NUP88-207ENST00000573584 RLIMQ9NVW2 624 aa15.08■□□□□ 0
NUP88-207ENST00000573584 RAPGEFL1Q9UHV5 662 aa15.08■□□□□ 0
NUP88-207ENST00000573584 CD84Q9UIB8 345 aa15.08■□□□□ 0
NUP88-207ENST00000573584 CORO2BQ9UQ03 480 aa15.08■□□□□ 0
NUP88-207ENST00000573584 PCDH7O60245 1069 aa15.07■□□□□ 0
NUP88-207ENST00000573584 GCM2O75603 506 aaPredicted RBP15.07■□□□□ 0
NUP88-207ENST00000573584 KCNK2O95069 426 aa15.07■□□□□ 0
NUP88-207ENST00000573584 OPN1SWP03999 348 aa15.07■□□□□ 0
NUP88-207ENST00000573584 SELPP16109 830 aa15.07■□□□□ 0
NUP88-207ENST00000573584 PPIBP23284 216 aaKnown RBP15.07■□□□□ 0
NUP88-207ENST00000573584 CYP4F2P78329 520 aa15.07■□□□□ 0
NUP88-207ENST00000573584 ZNF45Q02386 682 aa15.07■□□□□ 0
NUP88-207ENST00000573584 LMAN2Q12907 356 aa15.07■□□□□ 0
NUP88-207ENST00000573584 GAB1Q13480 694 aa15.07■□□□□ 0
NUP88-207ENST00000573584 DOC2AQ14183 400 aa15.07■□□□□ 0
NUP88-207ENST00000573584 TXNDC8Q6A555 127 aa15.07■□□□□ 0
NUP88-207ENST00000573584 PNCKQ6P2M8 343 aa15.07■□□□□ 0
NUP88-207ENST00000573584 TMEM150AQ86TG1 271 aa15.07■□□□□ 0
NUP88-207ENST00000573584 SYTL1Q8IYJ3 562 aa15.07■□□□□ 0
NUP88-207ENST00000573584 KBTBD8Q8NFY9 601 aa15.07■□□□□ 0
NUP88-207ENST00000573584 UTP15Q8TED0 518 aaKnown RBP15.07■□□□□ 0
NUP88-207ENST00000573584 RRAGCQ9HB90 399 aa15.07■□□□□ 0
NUP88-207ENST00000573584 FKBP14Q9NWM8 211 aa15.07■□□□□ 0
NUP88-207ENST00000573584 BTNL2Q9UIR0 455 aa15.07■□□□□ 0
NUP88-207ENST00000573584 TMPRSS11EQ9UL52 423 aa15.07■□□□□ 0
NUP88-207ENST00000573584 SCN8AQ9UQD0 1980 aa15.07■□□□□ 0
NUP88-207ENST00000573584 E7EQ34 232 aa15.07■□□□□ 0
NUP88-207ENST00000573584 CA12O43570 354 aa15.07■□□□□ 0
NUP88-207ENST00000573584 UGDHO60701 494 aa15.07■□□□□ 0
NUP88-207ENST00000573584 ABCB1P08183 1280 aaPredicted RBP15.07■□□□□ 0
NUP88-207ENST00000573584 ANXA4P09525 319 aaPredicted RBP15.07■□□□□ 0
NUP88-207ENST00000573584 PCGF2P35227 344 aa15.07■□□□□ 0
NUP88-207ENST00000573584 CASP9P55211 416 aa15.07■□□□□ 0
NUP88-207ENST00000573584 C21orf58P58505 322 aa15.07■□□□□ 0
NUP88-207ENST00000573584 GPNMBQ14956 572 aa15.07■□□□□ 0
NUP88-207ENST00000573584 TEAD4Q15561 434 aa15.07■□□□□ 0
NUP88-207ENST00000573584 HKDC1Q2TB90 917 aa15.07■□□□□ 0
NUP88-207ENST00000573584 ARMCX4Q5H9R4 360 aa15.07■□□□□ 0
NUP88-207ENST00000573584 LRRC73Q5JTD7 316 aa15.07■□□□□ 0
NUP88-207ENST00000573584 PLEKHS1Q5SXH7 462 aa15.07■□□□□ 0
NUP88-207ENST00000573584 DEPDC1Q5TB30 811 aa15.07■□□□□ 0
NUP88-207ENST00000573584 THOC6Q86W42 341 aaKnown RBP15.07■□□□□ 0
NUP88-207ENST00000573584 HEATR4Q86WZ0 1026 aa15.07■□□□□ 0
NUP88-207ENST00000573584 NPAS3Q8IXF0 933 aa15.07■□□□□ 0
NUP88-207ENST00000573584 NXF2Q9GZY0 626 aaKnown RBP15.07■□□□□ 0
NUP88-207ENST00000573584 ABCB8Q9NUT2 735 aa15.07■□□□□ 0
NUP88-207ENST00000573584 SH3BP4Q9P0V3 963 aa15.07■□□□□ 0
NUP88-207ENST00000573584 FAM8A1Q9UBU6 413 aa15.07■□□□□ 0
NUP88-207ENST00000573584 A8MU76 341 aa15.06■□□□□ 0
NUP88-207ENST00000573584 HSMCR30P0CW71 290 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ADORA3P0DMS8 318 aa15.06■□□□□ 0
NUP88-207ENST00000573584 ALOX12P18054 663 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CD70P32970 193 aa15.06■□□□□ 0
NUP88-207ENST00000573584 CRATP43155 626 aa15.06■□□□□ 0
NUP88-207ENST00000573584 OR1E2P47887 323 aa15.06■□□□□ 0
NUP88-207ENST00000573584 PXNP49023 591 aaPredicted RBP15.06■□□□□ 0
NUP88-207ENST00000573584 STK19P49842 368 aaPredicted RBP15.06■□□□□ 0
NUP88-207ENST00000573584 ZNF33BQ06732 778 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms