RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 EPHA2P29317 976 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 RRM2P31350 389 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 CLK1P49759 484 aaKnown RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 E2F2Q14209 437 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 C10orf62Q5T681 223 aaPredicted RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 TMEM236Q5W0B7 351 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 RFLNAQ6ZTI6 216 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 NCCRP1Q6ZVX7 275 aaPredicted RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 USP43Q70EL4 1123 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 ZNF513Q8N8E2 541 aaPredicted RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 DENND6BQ8NEG7 585 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 GOT1L1Q8NHS2 421 aaPredicted RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 MCFD2Q8NI22 146 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 SH3KBP1Q96B97 665 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 TMEM169Q96HH4 297 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 RAD9AQ99638 391 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 DPH2Q9BQC3 489 aaPredicted RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 ALOXE3Q9BYJ1 711 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 DCSTAMPQ9H295 470 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 ZDHHC6Q9H6R6 413 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 SGK2Q9HBY8 427 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 CPNE5Q9HCH3 593 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 INIPQ9NRY2 104 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 CFAP97Q9P2B7 532 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 NFKBIL1Q9UBC1 381 aaPredicted RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 CARNS1A5YM72 827 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 METTL15A6NJ78 407 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CLCA1A8K7I4 914 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 WASH3PC4AMC7 463 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 YY2O15391 372 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 AQP9O43315 295 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 AIREO43918 545 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 RFPL2O75678 378 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 C1QCP02747 245 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CATP04040 527 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 URODP06132 367 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 LCKP06239 509 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CKMP06732 381 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 ANXA4P09525 319 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 ITGA2P17301 1181 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 ALDH4A1P30038 563 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CTSKP43235 329 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 STK19P49842 368 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 RAE1P78406 368 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 SEMG2Q02383 582 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 EIF4HQ15056 248 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 ZNF181Q2M3W8 571 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 ZNF404Q494X3 552 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 AGTRAPQ6RW13 159 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 GALNT10Q86SR1 603 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 FAM124AQ86V42 546 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 RNF175Q8N4F7 328 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 TRAM1L1Q8N609 369 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CRELD1Q96HD1 420 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 RHNO1Q9BSD3 238 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 BBS2Q9BXC9 721 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 ABCG8Q9H221 673 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 FAM83DQ9H4H8 585 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 ENOPH1Q9UHY7 261 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 BTBD3Q9Y2F9 522 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 PCNTO95613 3336 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 MGAT4DA6NG13 374 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 E7EQ34 232 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 SGTAO43765 313 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 POLR2EP19388 210 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 GABRR2P28476 465 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 VIPR1P32241 457 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 RPL3P39023 403 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 IFI44LQ53G44 452 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 TOR1AIP1Q5JTV8 583 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 SERPINA13PQ6UXR4 307 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CCDC80Q76M96 950 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 SLC46A3Q7Z3Q1 461 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 ARMC8Q8IUR7 673 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 CADM3Q8N126 398 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 DNAJC22Q8N4W6 341 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 C1orf52Q8N6N3 182 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 AMER2Q8N7J2 671 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 OR56A3Q8NH54 315 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 C9orf43Q8TAL5 461 aaPredicted RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 REPS1Q96D71 796 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 ZNF558Q96NG5 402 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 COL21A1Q96P44 957 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 MTERF1Q99551 399 aaKnown RBP12.61□□□□□ -0.39
USB1-207ENST00000563149 MYOCQ99972 504 aa12.61□□□□□ -0.39
USB1-207ENST00000563149 THSD1Q9NS62 852 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms