RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 DOC2AQ14183 400 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 SLBPQ14493 270 aaKnown RBP eCLIP16.02■□□□□ 0.16
RPL28-209ENST00000560055 NCF4Q15080 339 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 CRTC2Q53ET0 693 aaPredicted RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 TMEM214Q6NUQ4 689 aaKnown RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 PRMT9Q6P2P2 845 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 C16orf46Q6P387 395 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 COX15Q7KZN9 410 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 IQCKQ8N0W5 287 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 TBC1D19Q8N5T2 526 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 SLC13A3Q8WWT9 602 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 STARD8Q92502 1023 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 PHF21BQ96EK2 531 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 PTCD3Q96EY7 689 aaKnown RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 MACROD1Q9BQ69 325 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 C17orf62Q9BQA9 187 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 PITHD1Q9GZP4 211 aaPredicted RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 ACTL8Q9H568 366 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 NT5DC2Q9H857 520 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 DCDC2Q9UHG0 476 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 EMCNQ9ULC0 261 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 MRPS2Q9Y399 296 aaKnown RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 A8MT66 165 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 C9J4A7 227 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 CLGNO14967 610 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 FOXS1O43638 330 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 GLRA3O75311 464 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 RECKO95980 971 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 SLC35G6P0C7Q6 338 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 EPB42P16452 691 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 KRT4P19013 534 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 CRHR1P34998 444 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 ZNF844Q08AG5 666 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 CHIT1Q13231 466 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 XKR6Q5GH73 641 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 ARHGAP40Q5TG30 622 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 TMIGD1Q6UXZ0 262 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 TRABD2AQ86V40 505 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 TEX9Q8N6V9 391 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 ENDOVQ8N8Q3 282 aaKnown RBP16.01■□□□□ 0.15
RPL28-209ENST00000560055 KCT2Q8NC54 265 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 NT5CQ8TCD5 201 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 CREB3L4Q8TEY5 395 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.01■□□□□ 0.15
RPL28-209ENST00000560055 FKBP10Q96AY3 582 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 MOCOSQ96EN8 888 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 SEC16BQ96JE7 1060 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 EFCAB11Q9BUY7 163 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 C1QTNF3Q9BXJ4 246 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 DRC3Q9H069 523 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 NDOR1Q9UHB4 597 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 FARSAQ9Y285 508 aaKnown RBP16.01■□□□□ 0.15
RPL28-209ENST00000560055 KALRNO60229 2985 aa16.01■□□□□ 0.15
RPL28-209ENST00000560055 ZNF891A8MT65 544 aaPredicted RBP16■□□□□ 0.15
RPL28-209ENST00000560055 NDUFS4O43181 175 aa16■□□□□ 0.15
RPL28-209ENST00000560055 CNOT3O75175 753 aaKnown RBP16■□□□□ 0.15
RPL28-209ENST00000560055 H2AFYO75367 372 aaKnown RBP16■□□□□ 0.15
RPL28-209ENST00000560055 CREG1O75629 220 aa16■□□□□ 0.15
RPL28-209ENST00000560055 KLF7O75840 302 aaPredicted RBP16■□□□□ 0.15
RPL28-209ENST00000560055 GSTM2P28161 218 aa16■□□□□ 0.15
RPL28-209ENST00000560055 EEF1DP29692 281 aaKnown RBP16■□□□□ 0.15
RPL28-209ENST00000560055 OR1D4P47884 311 aa16■□□□□ 0.15
RPL28-209ENST00000560055 RPS18P62269 152 aaKnown RBP16■□□□□ 0.15
RPL28-209ENST00000560055 RPS15P62841 145 aaKnown RBP16■□□□□ 0.15
RPL28-209ENST00000560055 IRF8Q02556 426 aa16■□□□□ 0.15
RPL28-209ENST00000560055 HYAL2Q12891 473 aa16■□□□□ 0.15
RPL28-209ENST00000560055 GTF2H2Q13888 395 aa16■□□□□ 0.15
RPL28-209ENST00000560055 SLC9A5Q14940 896 aa16■□□□□ 0.15
RPL28-209ENST00000560055 RBBP5Q15291 538 aaKnown RBP16■□□□□ 0.15
RPL28-209ENST00000560055 BEND6Q5SZJ8 279 aaPredicted RBP16■□□□□ 0.15
RPL28-209ENST00000560055 GTF2H2CQ6P1K8 395 aa16■□□□□ 0.15
RPL28-209ENST00000560055 GOLGA7Q7Z5G4 137 aa16■□□□□ 0.15
RPL28-209ENST00000560055 VN1R5Q7Z5H4 357 aa16■□□□□ 0.15
RPL28-209ENST00000560055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16■□□□□ 0.15
RPL28-209ENST00000560055 KRT78Q8N1N4 520 aa16■□□□□ 0.15
RPL28-209ENST00000560055 AFAP1L2Q8N4X5 818 aa16■□□□□ 0.15
RPL28-209ENST00000560055 METTL27Q8N6F8 245 aaPredicted RBP16■□□□□ 0.15
RPL28-209ENST00000560055 ZSCAN1Q8NBB4 408 aa16■□□□□ 0.15
RPL28-209ENST00000560055 TRPV3Q8NET8 790 aa16■□□□□ 0.15
RPL28-209ENST00000560055 TTLQ8NG68 377 aa16■□□□□ 0.15
RPL28-209ENST00000560055 SLC26A1Q9H2B4 701 aa16■□□□□ 0.15
RPL28-209ENST00000560055 MKS1Q9NXB0 559 aa16■□□□□ 0.15
RPL28-209ENST00000560055 IFT80Q9P2H3 777 aaPredicted RBP16■□□□□ 0.15
RPL28-209ENST00000560055 PCTPQ9UKL6 214 aa16■□□□□ 0.15
RPL28-209ENST00000560055 TCFL5Q9UL49 500 aa16■□□□□ 0.15
RPL28-209ENST00000560055 ZNF490Q9ULM2 529 aaPredicted RBP16■□□□□ 0.15
RPL28-209ENST00000560055 IGLV3-12A0A075B6K2 115 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 NKX2-8O15522 239 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 CTIFO43310 598 aaKnown RBP15.99■□□□□ 0.15
RPL28-209ENST00000560055 DLX3O60479 287 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 KATNA1O75449 491 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 ERLIN1O75477 346 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 NSA2O95478 260 aaKnown RBP15.99■□□□□ 0.15
RPL28-209ENST00000560055 TBX6O95947 436 aaPredicted RBP15.99■□□□□ 0.15
RPL28-209ENST00000560055 ALBP02768 609 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 PROCP04070 461 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 SERPINA6P08185 405 aa15.99■□□□□ 0.15
RPL28-209ENST00000560055 RPS17P08708 135 aaKnown RBP15.99■□□□□ 0.15
RPL28-209ENST00000560055 CCT5P48643 541 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms