RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	KANK2	Q63ZY3	851 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	CLEC6A	Q6EIG7	209 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	FRMPD2B	Q6IN97	320 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	MTERF4	Q7Z6M4	381 aa	Known RBP	11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	PPP1R3B	Q86XI6	285 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	DDIAS	Q8IXT1	998 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	ZNF781	Q8N8C0	355 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	ANKRD53	Q8N9V6	530 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	HUS1B	Q8NHY5	278 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	C7orf26	Q96N11	449 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	KCNA7	Q96RP8	456 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	CCT7	Q99832	543 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	RHBG	Q9H310	441 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	FBXO8	Q9NRD0	319 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	SIDT1	Q9NXL6	827 aa	Known RBP	11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	SLC39A1	Q9NY26	324 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	ZNF225	Q9UK10	706 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	TSC22D4	Q9Y3Q8	395 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904	TIMM22	Q9Y584	194 aa		11.96	□□□□□ -0.49
ABCD4-223	ENST00000555904		A0A088AWK7	358 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	LOC105369274	A0A096LPK9	316 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	LOC102723532	A0A0G2JNH3	316 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	FAM149A	A5PLN7	773 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	SLCO1B7	G3V0H7	640 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	FOXE1	O00358	373 aa	Predicted RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	MANBA	O00462	879 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	LCMT2	O60294	686 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	SERPINA6	P08185	405 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	VIM	P08670	466 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	HSD3B1	P14060	373 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ZNF10	P21506	573 aa	Predicted RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	HSD3B2	P26439	372 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ARRB2	P32121	409 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ID4	P47928	161 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	NEK2	P51955	445 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	RAP1GDS1	P52306	607 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	MAPK10	P53779	464 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	MC2R	Q01718	297 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	OCRL	Q01968	901 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	CSTF3	Q12996	717 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	NDUFA9	Q16795	377 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TUBB8	Q3ZCM7	444 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	C3orf38	Q5JPI3	329 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	WASHC2D	Q5SRD0	308 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	DCAF12	Q5T6F0	453 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	CES4A	Q5XG92	561 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TLDC1	Q6P9B6	456 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	CEACAM20	Q6UY09	585 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	FAM47E	Q6ZV65	393 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	CHSY3	Q70JA7	882 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ABHD13	Q7L211	337 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TMPRSS7	Q7RTY8	843 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TMEM126B	Q8IUX1	230 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	WDR75	Q8IWA0	830 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	OR4N4	Q8N0Y3	316 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	GBP7	Q8N8V2	638 aa	Predicted RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	WDR20	Q8TBZ3	569 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	PIWIL2	Q8TC59	973 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TWIST2	Q8WVJ9	160 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ZNF501	Q96CX3	271 aa	Predicted RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	MTFMT	Q96DP5	389 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	CMTM7	Q96FZ5	175 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TEFM	Q96QE5	360 aa	Known RBP	11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	SORT1	Q99523	831 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ZPBP	Q9BS86	351 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	NDC1	Q9BTX1	674 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ASPSCR1	Q9BZE9	553 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	CCDC134	Q9H6E4	229 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	BRF2	Q9HAW0	419 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	DMRT3	Q9NQL9	472 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	OCIAD1	Q9NX40	245 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	FAM53C	Q9NYF3	392 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	VTI1B	Q9UEU0	232 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	PISD	Q9UG56	409 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	ZDHHC2	Q9UIJ5	367 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	HAO1	Q9UJM8	370 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	SRPK3	Q9UPE1	567 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	SATB2	Q9UPW6	733 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	DMXL1	Q9Y485	3027 aa		11.95	□□□□□ -0.5
ABCD4-223	ENST00000555904	TRPC5OS	A6NMA1	111 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	MAGEB17	A8MXT2	336 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	TMEM233	B4DJY2	109 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	RGS14	O43566	566 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	SCRG1	O75711	98 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	PDYN	P01213	254 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	HBQ1	P09105	142 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	KIT	P10721	976 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	CCL4	P13236	92 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	PTX3	P26022	381 aa	Predicted RBP	11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	GABRA4	P48169	554 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	ARSF	P54793	590 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	FOXA1	P55317	472 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	FOXC1	Q12948	553 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	FAM214A	Q32MH5	1076 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	TMEM35A	Q53FP2	167 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	NIPAL1	Q6NVV3	410 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	TRIM40	Q6P9F5	258 aa		11.94	□□□□□ -0.5
ABCD4-223	ENST00000555904	VN1R4	Q7Z5H5	301 aa		11.94	□□□□□ -0.5

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