RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 KRT4P19013 534 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 FBLP22087 321 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 JAK1P23458 1154 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 FOLR3P41439 243 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 HSPA7P48741 367 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 CCNG1P51959 295 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 HERVK_113P63132 956 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 REEP5Q00765 189 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 BIKQ13323 160 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 E2F2Q14209 437 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 RBBP5Q15291 538 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 ARHGAP40Q5TG30 622 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 MED27Q6P2C8 311 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 OVCH1Q7RTY7 1134 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 HPS6Q86YV9 775 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 GSPT2Q8IYD1 628 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 CCDC63Q8NA47 563 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 OR2Y1Q8NGV0 311 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 STARD8Q92502 1023 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 EXT2Q93063 718 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 COL26A1Q96A83 441 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 TM4SF19Q96DZ7 209 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 FER1L6-AS2Q96M78 137 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 GPR78Q96P69 363 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 GBP5Q96PP8 586 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 OR1F2PQ96R84 312 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 TRMOQ9BU70 441 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 NTMT1Q9BV86 223 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 NPLQ9BXD5 320 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 C1QTNF3Q9BXJ4 246 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 ERVK-6Q9BXR3 956 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 TGIF2Q9GZN2 237 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 SPRTNQ9H040 489 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 RHBGQ9H310 441 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 EPB41L4BQ9H329 900 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 SSU72Q9NP77 194 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 SEMA3GQ9NS98 782 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 AHSPQ9NZD4 102 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 XPR1Q9UBH6 696 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 TCFL5Q9UL49 500 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 PPT2Q9UMR5 302 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 MRPS33Q9Y291 106 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 ACTL7BQ9Y614 415 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 CACNA1BQ00975 2339 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 PKD1L2Q7Z442 2459 aa9.79□□□□□ -0.84
TRAFD1-208ENST00000552890 H0YIV9 168 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ERVH48-1M5A8F1 160 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 TAF4O00268 1085 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 NDUFS4O43181 175 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CLDN9O95484 217 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ICAM2P13598 275 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ALOX12P18054 663 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 PTX3P26022 381 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 VARSP26640 1264 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GCAP28676 217 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 SERPINB5P36952 375 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ARL1P40616 181 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 KCNC1P48547 511 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 PKNOX1P55347 436 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CXADRP78310 365 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 DLG1Q12959 904 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GPS2Q13227 327 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CHIT1Q13231 466 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GTF2H2Q13888 395 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 UGT8Q16880 541 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 DEFB110Q30KQ9 67 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 KRT71Q3SY84 523 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CFAP157Q5JU67 520 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 IRAK1BP1Q5VVH5 260 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 MLIPQ5VWP3 458 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GRHL2Q6ISB3 625 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GTF2H2CQ6P1K8 395 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 TRIM40Q6P9F5 258 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 MED25Q71SY5 747 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 TIPARPQ7Z3E1 657 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 TEX9Q8N6V9 391 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GOLGA6L1Q8N7Z2 621 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 PTGR2Q8N8N7 351 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 TMEM102Q8N9M5 508 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ARMC2Q8NEN0 867 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CT55Q8WUE5 264 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 APOBEC4Q8WW27 367 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GAL3ST3Q96A11 431 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CMTM7Q96FZ5 175 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 PGM2Q96G03 612 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 KCNC2Q96PR1 638 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 OR4K3Q96R72 315 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ARHGAP9Q9BRR9 750 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 CHST8Q9H2A9 424 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ADNPQ9H2P0 1102 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 ACBD3Q9H3P7 528 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 IPPKQ9H8X2 491 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 COPS7BQ9H9Q2 264 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 GEMIN8Q9NWZ8 242 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 C19orf25Q9UFG5 118 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms