RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TIMM13Q9Y5L4 95 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PSAT1Q9Y617 370 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM120BA0PK00 339 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 H0Y626 953 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ZW10O43264 779 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 DNPH1O43598 174 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SOAT2O75908 522 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 HAUS5O94927 633 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 KCNH1O95259 989 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 FSTL3O95633 263 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 KITP10721 976 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ESRRAP11474 423 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CPA3P15088 417 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 GNAZP19086 355 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 MC4RP32245 332 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CAPZA2P47755 286 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SRSF11Q05519 484 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CYP4F3Q08477 520 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 MGAT2Q10469 447 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 GAS6Q14393 721 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 IL11RAQ14626 422 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CERCAMQ5T4B2 595 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 KLC3Q6P597 504 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 NHLRC1Q6VVB1 395 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF627Q7L945 461 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CCDC50Q8IVM0 306 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 THOC1Q96FV9 657 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PRR11Q96HE9 360 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 GPX7Q96SL4 187 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TBCDQ9BTW9 1192 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CALN1Q9BXU9 219 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TRIT1Q9H3H1 467 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CPNE5Q9HCH3 593 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SLC40A1Q9NP59 571 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CHRAC1Q9NRG0 131 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PHPT1Q9NRX4 125 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 GPATCH2LQ9NWQ4 482 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ASIC3Q9UHC3 531 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PADI2Q9Y2J8 665 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 A0A1B0GTW7 788 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PRSS38A1L453 326 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CCT8L1PA6NM43 557 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF701M0R085 212 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TUSC2O75896 110 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CDK14O94921 469 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CNOT4O95628 575 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TBX18O95935 607 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 RPSAP08865 295 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CYP2A7P20853 494 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 UGT1A4P22310 534 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 UGT1A3P35503 534 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 UGT1A5P35504 534 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NNMTP40261 264 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ABCG1P45844 678 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 MC2RQ01718 297 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 KCNC4Q03721 635 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SMTNL2Q2TAL5 461 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF628Q5EBL2 1059 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 DLEU7Q6UYE1 221 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 OTOP2Q7RTS6 562 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PROSER1Q86XN7 944 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 C17orf53Q8N3J3 647 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SRFBP1Q8NEF9 429 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NDRG1Q92597 394 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TCTN2Q96GX1 697 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 DNAJC1Q96KC8 554 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CPPED1Q9BRF8 314 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SLC17A9Q9BYT1 436 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ING2Q9H160 280 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TUBB1Q9H4B7 451 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 GP6Q9HCN6 339 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 C14orf105Q9NVL8 296 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 EXO1Q9UQ84 846 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 HTTP42858 3142 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 IGKV1-8A0A0C4DH67 115 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 DCDC2BA2VCK2 349 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 ASPDHA6ND91 283 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TTLL8A6PVC2 850 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TMCO5BA8MYB1 307 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 FXYD1O00168 92 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 IMPA2O14732 288 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 EFSO43281 561 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CHN1P15882 459 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NPPBP16860 134 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PCGF2P35227 344 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CLK1P49759 484 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TPMTP51580 245 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 PLTPP55058 493 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 AP2B1P63010 937 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 FUT7Q11130 342 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 CSRP2Q16527 193 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 DUOXA1Q1HG43 343 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 NRN1LQ496H8 165 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 RUNDC3AQ59EK9 446 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SAMD5Q5TGI4 173 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 BORAQ6PGQ7 559 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 POMZP3Q6PJE2 187 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 MTDHQ86UE4 582 aaKnown RBP4.67□□□□□ -1.66
SCAF11-212ENST00000549162 SMPDL3AQ92484 453 aa4.67□□□□□ -1.66
SCAF11-212ENST00000549162 TEFMQ96QE5 360 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms