RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 FBXO4Q9UKT5 387 aa6.89□□□□□ -1.31
CHPT1-203ENST00000546873 EMCNQ9ULC0 261 aa6.89□□□□□ -1.31
CHPT1-203ENST00000546873 CLEC4EQ9ULY5 219 aa6.89□□□□□ -1.31
CHPT1-203ENST00000546873 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
CHPT1-203ENST00000546873 RUVBL2Q9Y230 463 aaKnown RBP6.89□□□□□ -1.31
CHPT1-203ENST00000546873 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
CHPT1-203ENST00000546873 DENND4AQ7Z401 1863 aa6.89□□□□□ -1.31
CHPT1-203ENST00000546873 CACNA1IQ9P0X4 2223 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 NOTCH4Q99466 2003 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 SCN8AQ9UQD0 1980 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 TSPAN11A1L157 253 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 CCT8L1PA6NM43 557 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 H0YHG0 523 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 TRAFD1O14545 582 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 PRMT5O14744 637 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 HNRNPCL1O60812 293 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 SNNO75324 88 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 MATN4O95460 622 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 TOP3BO95985 862 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 APODP05090 189 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 CHRM2P08172 466 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 F7P08709 466 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 CCDC166P0CW27 439 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FGF3P11487 239 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 PKMP14618 531 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ARSAP15289 507 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 PSMC3P17980 439 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 MALP21145 153 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ATP5F1P24539 256 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 GABRB3P28472 473 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FMO4P31512 558 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 SLC8A1P32418 973 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 HNF1BP35680 557 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 SKIV2L2P42285 1042 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 SUOXP51687 545 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ADARP55265 1226 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 DCDC1P59894 354 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ABCE1P61221 599 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 NAA20P61599 178 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FCHO2Q0JRZ9 810 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ELP6Q0PNE2 266 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 NFATC2Q13469 925 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 RCN2Q14257 317 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ELAVL3Q14576 367 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ZNF284Q2VY69 593 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FLYWCH1Q4VC44 716 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 KHDC1Q4VXA5 237 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 TECRLQ5HYJ1 363 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 DGKKQ5KSL6 1271 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 THEMIS2Q5TEJ8 643 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 LRRC66Q68CR7 880 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 KIAA0895LQ68EN5 471 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FAM151BQ6UXP7 276 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ZCCHC23Q6ZST2 131 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FRA10AC1Q70Z53 315 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 PEG10Q86TG7 708 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 LDB1Q86U70 411 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 PDSS2Q86YH6 399 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 MFSD6LQ8IWD5 586 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 CENPLQ8N0S6 344 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 TERB1Q8NA31 727 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 OR2A12Q8NGT7 310 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 HCAR2Q8TDS4 363 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 C10orf82Q8WW14 230 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 KCNJ9Q92806 393 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ELSPBP1Q96BH3 223 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 SCRN2Q96FV2 425 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 FAR2Q96K12 515 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 MCCC1Q96RQ3 725 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 OLFM1Q99784 485 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 VRK1Q99986 396 aaPredicted RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ECT2Q9H8V3 914 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 EML4Q9HC35 981 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 BPIFA1Q9NP55 256 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ELOVL2Q9NXB9 296 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 IL17CQ9P0M4 197 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 CPSF2Q9P2I0 782 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 DKK3Q9UBP4 350 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 POLHQ9Y253 713 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 RRP15Q9Y3B9 282 aaKnown RBP6.88□□□□□ -1.31
CHPT1-203ENST00000546873 ENTPD2Q9Y5L3 495 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 MAST4O15021 2626 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
CHPT1-203ENST00000546873 MUC22E2RYF6 1773 aaPredicted RBP6.87□□□□□ -1.31
CHPT1-203ENST00000546873 GOLGA8QA0A0J9YX86 632 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 RGSL1A5PLK6 1076 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 GOLGA8OA6NCC3 632 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 TBC1D3BA6NDS4 549 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 NPIPB15A6NHN6 443 aaPredicted RBP6.87□□□□□ -1.31
CHPT1-203ENST00000546873 TTC34A8MYJ7 566 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 GOLGA8NF8WBI6 632 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 SLCO1B7G3V0H7 640 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 QSOX1O00391 747 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 KPNA3O00505 521 aaPredicted RBP6.87□□□□□ -1.31
CHPT1-203ENST00000546873 NPC1O15118 1278 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 TRIAP1O43715 76 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 MAGEC1O60732 1142 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 CCDC22O60826 627 aa6.87□□□□□ -1.31
CHPT1-203ENST00000546873 RNASEH1O60930 286 aaKnown RBP6.87□□□□□ -1.31
CHPT1-203ENST00000546873 ECI2O75521 394 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms