RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NETO1Q8TDF5 533 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 ZFP90Q8TF47 636 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 RASSF5Q8WWW0 418 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 SELENOMQ8WWX9 145 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 ATL1Q8WXF7 558 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 TMCO6Q96DC7 493 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 COL21A1Q96P44 957 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 SNX18Q96RF0 628 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 SLC12A9Q9BXP2 914 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 MRPL9Q9BYD2 267 aaKnown RBP6.26□□□□□ -1.41
SNHG1-225ENST00000545920 CIPCQ9C0C6 399 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 DCSTAMPQ9H295 470 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 ELOVL6Q9H5J4 265 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 NSUN3Q9H649 340 aaKnown RBP6.26□□□□□ -1.41
SNHG1-225ENST00000545920 CARS2Q9HA77 564 aaKnown RBP6.26□□□□□ -1.41
SNHG1-225ENST00000545920 BRF2Q9HAW0 419 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 C3orf14Q9HBI5 128 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 RAD18Q9NS91 495 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 TMEM161AQ9NX61 479 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 SIRT5Q9NXA8 310 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 KLQ9UEF7 1012 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 PSORS1C1Q9UIG5 152 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 RUVBL1Q9Y265 456 aaKnown RBP6.26□□□□□ -1.41
SNHG1-225ENST00000545920 CFL2Q9Y281 166 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 POFUT2Q9Y2G5 429 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 SAMHD1Q9Y3Z3 626 aaKnown RBP6.26□□□□□ -1.41
SNHG1-225ENST00000545920 ZFP37Q9Y6Q3 630 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-225ENST00000545920 NLRC5Q86WI3 1866 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 SCN10AQ9Y5Y9 1956 aa6.26□□□□□ -1.41
SNHG1-225ENST00000545920 MIA3Q5JRA6 1907 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 IGLV3-16A0A075B6K0 115 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 KCNE1BA0A087WTH5 132 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 FAM172BPA6NC97 362 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SLC38A8A6NNN8 435 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 TBKBP1A7MCY6 615 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CLCA1A8K7I4 914 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 MAGEB17A8MXT2 336 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 TMX2-CTNND1H3BSU7 103 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CLIC1O00299 241 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HAT1O14929 419 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SEPT4O43236 478 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 DYRK3O43781 588 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 AIREO43918 545 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 OR1I1O60431 355 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 RFPL2O75678 378 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SLC25A14O95258 325 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PRAMEF1O95521 474 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 FTH1P02794 183 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 MT-ND1P03886 318 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 MT-ND2P03891 347 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CDK1P06493 297 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HIST1H2AGP0C0S8 130 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 OR56A5P0C7T3 313 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PIRTP0C851 137 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CYBAP13498 195 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 JUPP14923 745 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HIST1H2ADP20671 130 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CYP2A7P20853 494 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 AGXTP21549 392 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 COL8A1P27658 744 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CD6P30203 668 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 GGT2P36268 569 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SPAM1P38567 509 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HNF4AP41235 474 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SLC6A12P48065 614 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CLK3P49761 638 aaKnown RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 DAPP51397 102 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PTPRCAPQ14761 206 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PTGR1Q14914 329 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 TRIM71Q2Q1W2 868 aaKnown RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 C2orf27AQ580R0 203 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PAGE2BQ5JRK9 111 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 MPP7Q5T2T1 576 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 FRG2Q64ET8 278 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 TMEM53Q6P2H8 277 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 C19orf48Q6RUI8 117 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SCIMPQ6UWF3 145 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PAGE2Q7Z2X7 111 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SLC46A3Q7Z3Q1 461 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CYP4Z1Q86W10 505 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 LYSMD2Q8IV50 215 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 RAVER1Q8IY67 606 aaKnown RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 SYNPOQ8N3V7 929 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 FAM86B1Q8N7N1 296 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 ATG16L2Q8NAA4 619 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 C11orf65Q8NCR3 313 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 THAP3Q8WTV1 239 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 PROX1Q92786 737 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 TRMT2BQ96GJ1 504 aaKnown RBP6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HIST1H2AHQ96KK5 128 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 FRG2BQ96QU4 278 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HIST1H2AJQ99878 128 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 MAPKAP1Q9BPZ7 522 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 HEPHQ9BQS7 1158 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 CORO1BQ9BR76 489 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 COPS4Q9BT78 406 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 H2AFJQ9BTM1 129 aa6.25□□□□□ -1.41
SNHG1-225ENST00000545920 TRAF4Q9BUZ4 470 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms