RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 DFFAO00273 331 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 ADAM10O14672 748 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 NDC80O14777 642 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 MATN3O15232 486 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 MFSD11O43934 449 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 WISP2O76076 250 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 URI1O94763 535 aaPredicted RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 CNOT4O95628 575 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 POP4O95707 220 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 IGHEP01854 428 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CRYABP02511 175 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 UGT2B4P06133 528 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CCNB1P14635 433 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CTSSP25774 331 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 GKP32189 559 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CXCR5P32302 372 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 PAPOLAP51003 745 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 EIF3EP60228 445 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 SNRPD1P62314 119 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 DYNLT1P63172 113 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 GBE1Q04446 702 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 PPIDQ08752 370 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 CYP1B1Q16678 543 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 ZNF805Q5CZA5 627 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 LEKR1Q6ZMV7 388 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 RINLQ6ZS11 566 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 SYDE1Q6ZW31 735 aaPredicted RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 NRROSQ86YC3 692 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 BCL6BQ8N143 479 aaPredicted RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 NKAPQ8N5F7 415 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 LRRC17Q8N6Y2 441 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 NPWQ8N729 165 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 ENDOVQ8N8Q3 282 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 CCNYQ8ND76 341 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CATSPER1Q8NEC5 780 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 OR2AP1Q8NGE2 309 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 OR1N1Q8NGS0 311 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 SLC35B2Q8TB61 432 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 ACTL9Q8TC94 416 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 ASB5Q8WWX0 329 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 RAB7BQ96AH8 199 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 HMCESQ96FZ2 354 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 IP6K3Q96PC2 410 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 GBP5Q96PP8 586 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 QKIQ96PU8 341 aaKnown RBP eCLIP6.44□□□□□ -1.38
LDHA-223ENST00000545215 PSKH2Q96QS6 385 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 CRB3Q9BUF7 120 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 APOOQ9BUR5 198 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 NLNQ9BYT8 704 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 MAGEB5Q9BZ81 275 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 SLC39A8Q9C0K1 460 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 WDR12Q9GZL7 423 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 ZMAT3Q9HA38 289 aaKnown RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 ETNK2Q9NVF9 386 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 UBA2Q9UBT2 640 aaPredicted RBP6.44□□□□□ -1.38
LDHA-223ENST00000545215 ITM2BQ9Y287 266 aa6.44□□□□□ -1.38
LDHA-223ENST00000545215 A0A1W2PQ67 120 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 H7C0C1 242 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 KPNA5O15131 536 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 LIASO43766 372 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 PMPCBO75439 489 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 TMCC1O94876 653 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 CD160O95971 181 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 IGSF6O95976 241 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 GAS8O95995 478 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 GSRP00390 522 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 CA4P22748 312 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 TNFSF4P23510 183 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 SSTR4P31391 388 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 ATP5OP48047 213 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 SLC6A9P48067 706 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 CSNK1DP48730 415 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 PPM1FP49593 454 aaPredicted RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 DLX5P56178 289 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 IFI35P80217 286 aaPredicted RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 RAD51Q06609 339 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 CD69Q07108 199 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 NSUN2Q08J23 767 aaKnown RBP eCLIP6.43□□□□□ -1.38
LDHA-223ENST00000545215 MYLK3Q32MK0 819 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 TUBB8Q3ZCM7 444 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 LRRC73Q5JTD7 316 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 ATXN7L2Q5T6C5 722 aaPredicted RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 MARC1Q5VT66 337 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 ITPRIPL1Q6GPH6 555 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 PWWP2BQ6NUJ5 590 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 ZNF572Q7Z3I7 529 aaPredicted RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 CEP112Q8N8E3 955 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 AGAP11Q8TF27 550 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 MAML1Q92585 1016 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 SLCO2A1Q92959 643 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 MAGOHBQ96A72 148 aaKnown RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 CELF6Q96J87 481 aaKnown RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 MAGED4Q96JG8 741 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 GDAP1L1Q96MZ0 367 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 KLHL32Q96NJ5 620 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 TACO1Q9BSH4 297 aaKnown RBP6.43□□□□□ -1.38
LDHA-223ENST00000545215 C1QTNF7Q9BXJ2 289 aa6.43□□□□□ -1.38
LDHA-223ENST00000545215 POLR1EQ9GZS1 481 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms