RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 MAGEA3P43357 314 aa19.48■□□□□ 0.71
BPTF-208ENST00000544778 CHRNA4P43681 627 aa19.48■□□□□ 0.71
BPTF-208ENST00000544778 IRF5Q13568 498 aa19.48■□□□□ 0.71
BPTF-208ENST00000544778 PGM2L1Q6PCE3 622 aa19.48■□□□□ 0.71
BPTF-208ENST00000544778 TAMM41Q96BW9 452 aa19.48■□□□□ 0.71
BPTF-208ENST00000544778 CLIC1O00299 241 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 FARS2O95363 451 aaKnown RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 CNOT4O95628 575 aaKnown RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 PLATP00750 562 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 IFNGR1P15260 489 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 PRKCZQ05513 592 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 TTLL10Q6ZVT0 673 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 LGI4Q8N135 537 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 DNAJB9Q9UBS3 223 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 CHRNA1P02708 482 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 CHRFAM7AQ494W8 412 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 DNAJB7Q7Z6W7 309 aaPredicted RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 TUBA8Q9NY65 449 aaPredicted RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 REV1Q9UBZ9 1251 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 EDDM13A0A1B0GTR0 161 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 TBX18O95935 607 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 PEX2P28328 305 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 DSC3Q14574 896 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 SEC23BQ15437 767 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 TMCO2Q7Z6W1 182 aaPredicted RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 OR1F2PQ96R84 312 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 SLC7A11Q9UPY5 501 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 SMPD1P17405 629 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 HMGCS1Q01581 520 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 TREX2Q9BQ50 279 aaPredicted RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 NUFIP1Q9UHK0 495 aaKnown RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 MEGF6O75095 1541 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 FAM170BA6NMN3 283 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 AHSA1O95433 338 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 ANXA3P12429 323 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 CHRNA6Q15825 494 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 TSTQ16762 297 aaKnown RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 LRRC37A5PQ49AS3 106 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 ILDR1Q86SU0 546 aaPredicted RBP19.47■□□□□ 0.71
BPTF-208ENST00000544778 HERC2P3Q9BVR0 1158 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 LRCH4O75427 683 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 ANKRD22Q5VYY1 191 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 TATDN1Q6P1N9 297 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 GATSQ8NAP1 163 aa19.47■□□□□ 0.71
BPTF-208ENST00000544778 AFDNP55196 1824 aaKnown RBP19.46■□□□□ 0.71
BPTF-208ENST00000544778 PON3Q15166 354 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 MTFR2Q6P444 385 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 THOC6Q86W42 341 aaKnown RBP19.46■□□□□ 0.71
BPTF-208ENST00000544778 FUZQ9BT04 418 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 PEX10O60683 326 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 PSMA6P60900 246 aaKnown RBP19.46■□□□□ 0.71
BPTF-208ENST00000544778 CLEC4CQ8WTT0 213 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 GPR25O00155 361 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 PRDX6P30041 224 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 NRIP1P48552 1158 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 ZNF84P51523 738 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 RTP1P59025 263 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 RPS24P62847 133 aaKnown RBP19.46■□□□□ 0.71
BPTF-208ENST00000544778 LRRC55Q6ZSA7 311 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 GPR88Q9GZN0 384 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 KCNK6Q9Y257 313 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 SLIT1O75093 1534 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 CELF5Q8N6W0 485 aaKnown RBP19.46■□□□□ 0.71
BPTF-208ENST00000544778 C1orf127Q8N9H9 656 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 SPOCK2Q92563 424 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 TLR6Q9Y2C9 796 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 RAD51DO75771 328 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 ZNF550Q7Z398 422 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 ZNF100Q8IYN0 542 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 SNIP1Q8TAD8 396 aaKnown RBP19.46■□□□□ 0.71
BPTF-208ENST00000544778 WACQ9BTA9 647 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 PADI2Q9Y2J8 665 aa19.46■□□□□ 0.71
BPTF-208ENST00000544778 MRPL3P09001 348 aaKnown RBP19.45■□□□□ 0.7
BPTF-208ENST00000544778 PRPS1L1P21108 318 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 AQP4P55087 323 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 ABRAXAS2Q15018 415 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 TMEM35AQ53FP2 167 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 SLC35F1Q5T1Q4 408 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 ZNF776Q68DI1 518 aaPredicted RBP19.45■□□□□ 0.7
BPTF-208ENST00000544778 OR8D2Q9GZM6 311 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 BCAS3Q9H6U6 928 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 CTBP2P56545 445 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 Q6ZVU0 165 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 TIGD4Q8IY51 512 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 PHTF2Q8N3S3 785 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 C1orf52Q8N6N3 182 aaKnown RBP19.45■□□□□ 0.7
BPTF-208ENST00000544778 FANK1Q8TC84 345 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 TM9SF3Q9HD45 589 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 CNTN6Q9UQ52 1028 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 HAS3O00219 553 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 SRYQ05066 204 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 NPTX1Q15818 432 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 WDR45BQ5MNZ6 344 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 OR4F3Q6IEY1 312 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 SLC16A9Q7RTY1 509 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 HSPBAP1Q96EW2 488 aa19.45■□□□□ 0.7
BPTF-208ENST00000544778 GLOD5A6NK44 160 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms