RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 RHBDF1Q96CC6 855 aa22.06■■□□□ 1.12
CHFR-222ENST00000544093 UBXN10Q96LJ8 280 aa22.06■■□□□ 1.12
CHFR-222ENST00000544093 ZFP69BQ9UJL9 534 aa22.06■■□□□ 1.12
CHFR-222ENST00000544093 A0A1W2PQ72 361 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 PHGDHO43175 533 aaKnown RBP22.05■■□□□ 1.12
CHFR-222ENST00000544093 NDUFS4O43181 175 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 HEXBP07686 556 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 CD1DP15813 335 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 IL10P22301 178 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 VARSP26640 1264 aaKnown RBP22.05■■□□□ 1.12
CHFR-222ENST00000544093 CRABP2P29373 138 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 FOXK1P85037 733 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 RGS1Q08116 209 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 RAPSNQ13702 412 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 TMEM151BQ8IW70 566 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 TRPV3Q8NET8 790 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 OR9A4Q8NGU2 314 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 PNPLA2Q96AD5 504 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 TRIM44Q96DX7 344 aaPredicted RBP22.05■■□□□ 1.12
CHFR-222ENST00000544093 TSNARE1Q96NA8 513 aa22.05■■□□□ 1.12
CHFR-222ENST00000544093 ZNF552Q9H707 407 aaPredicted RBP22.05■■□□□ 1.12
CHFR-222ENST00000544093 NBASA2RRP1 2371 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 DOCK10Q96BY6 2186 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 URADA6NGE7 173 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 SCTRP47872 440 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 SLC6A12P48065 614 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 AP2B1P63010 937 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 REEP5Q00765 189 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 SLMAPQ14BN4 828 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 CATSPEREQ5SY80 951 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 AGAP7PQ5VUJ5 663 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 SULT1C3Q6IMI6 304 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 JMJD6Q6NYC1 403 aaPredicted RBP22.04■■□□□ 1.12
CHFR-222ENST00000544093 NXPE4Q6UWF7 544 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 RAPH1Q70E73 1250 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 NDUFAF7Q7L592 441 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 TMPRSS11BQ86T26 416 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 LAPTM4BQ86VI4 370 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 GPSM1Q86YR5 675 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 ZC3H7AQ8IWR0 971 aaKnown RBP22.04■■□□□ 1.12
CHFR-222ENST00000544093 KCT2Q8NC54 265 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 NT5CQ8TCD5 201 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 KIAA1191Q96A73 305 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 AGAP4Q96P64 663 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 CYTH2Q99418 400 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 LHPPQ9H008 270 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 GPRC5BQ9NZH0 403 aa22.04■■□□□ 1.12
CHFR-222ENST00000544093 MRPS2Q9Y399 296 aaKnown RBP22.04■■□□□ 1.12
CHFR-222ENST00000544093 PRRC2CQ9Y520 2896 aaKnown RBP22.04■■□□□ 1.12
CHFR-222ENST00000544093 CCDC189A1A4V9 331 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 TTLL8A6PVC2 850 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 WDR47O94967 919 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 BMP10O95393 424 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 STATHP02808 62 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 S100BP04271 92 aaPredicted RBP22.03■■□□□ 1.12
CHFR-222ENST00000544093 IL1RNP18510 177 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 GSTM2P28161 218 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 GGT5P36269 586 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 MEF2AQ02078 507 aaPredicted RBP22.03■■□□□ 1.12
CHFR-222ENST00000544093 NADK2Q4G0N4 442 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 ABHD13Q7L211 337 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 TBC1D1Q86TI0 1168 aaPredicted RBP22.03■■□□□ 1.12
CHFR-222ENST00000544093 ATCAYQ86WG3 371 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 TTLQ8NG68 377 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 OR51Q1Q8NH59 317 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 ZCCHC10Q8TBK6 192 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 STAG3L4Q8TBR4 150 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 METTL21AQ8WXB1 218 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 SEC16BQ96JE7 1060 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 PITHD1Q9GZP4 211 aaPredicted RBP22.03■■□□□ 1.12
CHFR-222ENST00000544093 NMRAL1Q9HBL8 299 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 RIC8BQ9NVN3 520 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 WWOXQ9NZC7 414 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 MKL2Q9ULH7 1088 aa22.03■■□□□ 1.12
CHFR-222ENST00000544093 LOC102723996A0A087X1L8 192 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 NSG1A0A0A6YYJ2 146 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 H2AFYO75367 372 aaKnown RBP22.02■■□□□ 1.12
CHFR-222ENST00000544093 SORBS2O94875 1100 aaKnown RBP22.02■■□□□ 1.12
CHFR-222ENST00000544093 CDC16Q13042 620 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 ZADH2Q8N4Q0 377 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 AFAP1L2Q8N4X5 818 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 EFCAB3Q8N7B9 438 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 PDPRQ8NCN5 879 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 FMO2Q99518 471 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 MACROD1Q9BQ69 325 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 CLK4Q9HAZ1 481 aaKnown RBP22.02■■□□□ 1.12
CHFR-222ENST00000544093 SLAMF7Q9NQ25 335 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 RNF112Q9ULX5 631 aa22.02■■□□□ 1.12
CHFR-222ENST00000544093 SCN3AQ9NY46 2000 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 NCF1BA6NI72 391 aaPredicted RBP22.01■■□□□ 1.11
CHFR-222ENST00000544093 NCF1CA8MVU1 366 aaPredicted RBP22.01■■□□□ 1.11
CHFR-222ENST00000544093 PYCARD-AS1I3L0S3 204 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 FFAR3O14843 346 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 GPR42O15529 346 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 FAM155BO75949 473 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 KLHL18O94889 574 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 SLC35E2BP0CK96 405 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 C8orf89P0DMQ9 161 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 COX6A1P12074 109 aa22.01■■□□□ 1.11
CHFR-222ENST00000544093 NCF1P14598 390 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms