RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NPPBP16860 134 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 EEF1DP29692 281 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 GRK3P35626 688 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 ARL1P40616 181 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 NFATC3Q12968 1075 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 SSPNQ14714 243 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 SETDB1Q15047 1291 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 PDK4Q16654 411 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 CCDC153Q494R4 210 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 NKAIN1Q4KMZ8 207 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 ZNF425Q6IV72 752 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 FBXO42Q6P3S6 717 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 LRRC70Q7Z2Q7 622 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 TMPRSS11BQ86T26 416 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 TEX9Q8N6V9 391 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 BANPQ8N9N5 519 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 TTC29Q8NA56 475 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 SLC5A11Q8WWX8 675 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 FKBP10Q96AY3 582 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 PGM2Q96G03 612 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 ABHD17AQ96GS6 310 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 PRAP1Q96NZ9 151 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 SLC26A1Q9H2B4 701 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 C12orf65Q9H3J6 166 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 ACBD3Q9H3P7 528 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 KCNK9Q9NPC2 374 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 CUTCQ9NTM9 273 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 DHCR7Q9UBM7 475 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 MID2Q9UJV3 735 aa12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 TNPO3Q9Y5L0 923 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-212ENST00000533058 IGKV1-8A0A0C4DH67 115 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 A8MT66 165 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 K7EPI3 171 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 H2AFYO75367 372 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 EZRP15311 586 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 ATP5F1P24539 256 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 GGT5P36269 586 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 SLC6A12P48065 614 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 CCR8P51685 355 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 CDC16Q13042 620 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 ZXDCQ2QGD7 858 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 WASHC2DQ5SRD0 308 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 SH2D5Q6ZV89 423 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 TTLL10Q6ZVT0 673 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 MED25Q71SY5 747 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 PAQR7Q86WK9 346 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 RAB43Q86YS6 212 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 TBC1D19Q8N5T2 526 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 TMEM102Q8N9M5 508 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 OR2Y1Q8NGV0 311 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 PPP4R1Q8TF05 950 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 OR4K3Q96R72 315 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 CAPS2Q9BXY5 557 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 WDR54Q9H977 334 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 TMBIM4Q9HC24 238 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 MLXIPLQ9NP71 852 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 SLC22A11Q9NSA0 550 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 TMEM184CQ9NVA4 438 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 GPN3Q9UHW5 284 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 SH2B3Q9UQQ2 575 aa12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 PCDHGA9Q9Y5G4 932 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 HEMK1Q9Y5R4 338 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 SNRNP200O75643 2136 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-212ENST00000533058 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 LRRC14BA6NHZ5 514 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 HAT1O14929 419 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 DLX3O60479 287 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PLIN3O60664 434 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 CEACAM4O75871 244 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 SIX3O95343 332 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 IGHEP01854 428 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PROCP04070 461 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 CPA3P15088 417 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 CREB1P16220 341 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 EPB42P16452 691 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 GNAZP19086 355 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ITGAXP20702 1163 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ALAS2P22557 587 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PIK3CGP48736 1102 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 NFKB2Q00653 900 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PRTGQ2VWP7 1150 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 XKR6Q5GH73 641 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 CATSPEREQ5SY80 951 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 C1orf189Q5VU69 101 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 MLIPQ5VWP3 458 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 FRMPD2BQ6IN97 320 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PRMT9Q6P2P2 845 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 NXPE4Q6UWF7 544 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZYG11AQ6WRX3 759 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 OVCH1Q7RTY7 1134 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 EXOC3L1Q86VI1 746 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms