RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ILKAPQ9H0C8 392 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 ZBTB20Q9HC78 741 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 SLC22A14Q9Y267 594 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 OARD1Q9Y530 152 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 KCNE2Q9Y6J6 123 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 TRBC2A0A5B9 178 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 FAM159BA6NKW6 160 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 SGK494L7N484 410 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 BMP10O95393 424 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 SERPIND1P05546 499 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 IL1RNP18510 177 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 GP5P40197 560 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 MAGEA4P43358 317 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 GPX6P59796 221 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 PWP1Q13610 501 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 FLNCQ14315 2725 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 TRADDQ15628 312 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 TSNQ15631 228 aaKnown RBP16.32■□□□□ 0.2
PHRF1-204ENST00000532550 MFSD4BQ5TF39 518 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 PRSS41Q7RTY9 318 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 ZC3H7AQ8IWR0 971 aaKnown RBP16.32■□□□□ 0.2
PHRF1-204ENST00000532550 IQCKQ8N0W5 287 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 GALNT11Q8NCW6 608 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 TSNARE1Q96NA8 513 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 RBBP8Q99708 897 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 DERL2Q9GZP9 239 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 CAB39LQ9H9S4 337 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 SLC22A7Q9Y694 548 aa16.32■□□□□ 0.2
PHRF1-204ENST00000532550 ESPL1Q14674 2120 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 ASH1LQ9NR48 2969 aaKnown RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 SETXQ7Z333 2677 aaKnown RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 NDUFS4O43181 175 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 CCDC166P0CW27 439 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 COX6A1P12074 109 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 STMN1P16949 149 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 SPRP35270 261 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 XCR1P46094 333 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 SNRPNP63162 240 aaKnown RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 EEF1A2Q05639 463 aaKnown RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 RGS1Q08116 209 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 Q0VFX4 171 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 UBAP2LQ14157 1087 aaKnown RBP16.31■□□□□ 0.2
PHRF1-204ENST00000532550 HERC3Q15034 1050 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 MINDY4Q4G0A6 757 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 GRTP1Q5TC63 336 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 NXPE4Q6UWF7 544 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 ISLR2Q6UXK2 745 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 Q6ZS92 163 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 DNAJB14Q8TBM8 379 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 LMF1Q96S06 567 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 AIF1LQ9BQI0 150 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 EPS8L2Q9H6S3 715 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 PELI2Q9HAT8 420 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 LRRC4CQ9HCJ2 640 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 RIC8BQ9NVN3 520 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 HCN3Q9P1Z3 774 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 ZFP69BQ9UJL9 534 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 NAALAD2Q9Y3Q0 740 aa16.31■□□□□ 0.2
PHRF1-204ENST00000532550 IGHV1-45A0A0A0MS14 117 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 PHGDHO43175 533 aaKnown RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 H2AFYO75367 372 aaKnown RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 C8orf89P0DMQ9 161 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 ICAM2P13598 275 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 AHRP35869 848 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 SCTRP47872 440 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 GLRBP48167 497 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 SKP1P63208 163 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 SLC7A5Q01650 507 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 RBBP5Q15291 538 aaKnown RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 NIPAL1Q6NVV3 410 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 TMEM205Q6UW68 189 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 IGFL2Q6UWQ7 119 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 ZDHHC24Q6UX98 284 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 LINC00696Q6ZRV3 163 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 SPATA6LQ8N4H0 392 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 CISD2Q8N5K1 135 aaKnown RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 PPM1NQ8N819 430 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 ZNF740Q8NDX6 193 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 C16orf45Q96MC5 204 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 CYTH2Q99418 400 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 GPR22Q99680 433 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 WDR77Q9BQA1 342 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 LRRC1Q9BTT6 524 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 UNKQ9C0B0 810 aaKnown RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 C19orf25Q9UFG5 118 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 RELNP78509 3460 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 SHANK1Q9Y566 2161 aa16.3■□□□□ 0.2
PHRF1-204ENST00000532550 SPENQ96T58 3664 aaKnown RBP16.3■□□□□ 0.2
PHRF1-204ENST00000532550 DOPEY2Q9Y3R5 2298 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 LOC102723996A0A087X1L8 192 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 A0A1W2PQ72 361 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 URADA6NGE7 173 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 NCF1BA6NI72 391 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-204ENST00000532550 NCF1CA8MVU1 366 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-204ENST00000532550 RDH16O75452 317 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 JRKO75564 520 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 WFS1O76024 890 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 KLHL18O94889 574 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms