RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 GYPEP15421 78 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 ITGALP20701 1170 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 FDXRP22570 491 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CRABP2P29373 138 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 ALDH3A1P30838 453 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SPAM1P38567 509 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 MMP12P39900 470 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 HADHAP40939 763 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 EIF2DP41214 584 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 SKIV2L2P42285 1042 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 KIR2DL3P43628 341 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SPINT3P49223 89 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TTPAP49638 278 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CSRP3P50461 194 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 BLVRAP53004 296 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 PNLIPRP1P54315 467 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 RAB10P61026 200 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 POLR2LP62875 67 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 CNTN1Q12860 1018 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 OVGP1Q12889 678 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 RALGDSQ12967 914 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 NFATC2Q13469 925 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TOP3AQ13472 1001 aaPredicted RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 ELAVL3Q14576 367 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 PCLAFQ15004 111 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 ACOX1Q15067 660 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CHI3L2Q15782 390 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 INSCQ1MX18 579 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 ATP13A5Q4VNC0 1218 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CTSL3PQ5NE16 218 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 LRRC8EQ6NSJ5 796 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 FAM45BPQ6NSW5 357 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CGB2Q6NT52 195 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TMEM207Q6UWW9 146 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 DPPA4Q7L190 304 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 GALNTL5Q7Z4T8 443 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 HSD11B1LQ7Z5J1 315 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SNX20Q7Z614 316 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CPLX4Q7Z7G2 160 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 GALNT7Q86SF2 657 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SLC9B2Q86UD5 537 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 NUDCD3Q8IVD9 361 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 MMAAQ8IVH4 418 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 C10orf107Q8IVU9 208 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 NRSN1Q8IZ57 195 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 PELI3Q8N2H9 469 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 PLA2G15Q8NCC3 412 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TMIEQ8NEW7 156 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 FBXO30Q8TB52 745 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 FAM45AQ8TCE6 357 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 MIPOL1Q8TD10 442 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 LKAAEAR1Q8TD35 194 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 UTP15Q8TED0 518 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 HEXDCQ8WVB3 486 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 LPGAT1Q92604 370 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 EXT2Q93063 718 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SCAMP4Q969E2 229 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 GFM2Q969S9 779 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.06□□□□□ -1.76
CD44-226ENST00000527889 MOCOSQ96EN8 888 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SGF29Q96ES7 293 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SCRN2Q96FV2 425 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 MAELQ96JY0 434 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 CABS1Q96KC9 395 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 COG8Q96MW5 612 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TSNARE1Q96NA8 513 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 GPR78Q96P69 363 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 LYSMD1Q96S90 227 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 GPR21Q99679 349 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 P2RY13Q9BPV8 354 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TSSK1BQ9BXA7 367 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SPATA16Q9BXB7 569 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 NSRP1Q9H0G5 558 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 SLC6A17Q9H1V8 727 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 VCX3BQ9H321 246 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 TMEM245Q9H330 911 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 NCOR1P1Q9H4R4 102 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 ASB8Q9H765 288 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 KCNK12Q9HB15 430 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 IL26Q9NPH9 171 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 PRSS16Q9NQE7 514 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 INTS10Q9NVR2 710 aaKnown RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 ZNF624Q9P2J8 865 aaPredicted RBP4.06□□□□□ -1.76
CD44-226ENST00000527889 GALPQ9UBC7 116 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 DCDC2Q9UHG0 476 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 SLC23A1Q9UHI7 598 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 CRLS1Q9UJA2 301 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 LAMP5Q9UJQ1 280 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 MID2Q9UJV3 735 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 PPIL1Q9Y3C6 166 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 STON1Q9Y6Q2 735 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 PIAS3Q9Y6X2 628 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 KMT2EQ8IZD2 1858 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 FRYLO94915 3013 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 HECTD1Q9ULT8 2610 aa4.06□□□□□ -1.76
CD44-226ENST00000527889 EML6Q6ZMW3 1958 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CNOT1A5YKK6 2376 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 CNTRLQ7Z7A1 2325 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 A0A087X1B8 175 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 TRBV5-4A0A0C4DH59 114 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms