RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 EXOC3L1Q86VI1 746 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 SPACA3Q8IXA5 215 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 KRT78Q8N1N4 520 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ARHGEF39Q8N4T4 335 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ANKRD53Q8N9V6 530 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 CAMKVQ8NCB2 501 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 RDH11Q8TC12 318 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 PROKR1Q8TCW9 393 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 SLC13A3Q8WWT9 602 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 CCDC126Q96EE4 140 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 NSUN5Q96P11 429 aaKnown RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 GBP5Q96PP8 586 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 DPH2Q9BQC3 489 aaPredicted RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 EFCAB11Q9BUY7 163 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ERVK-6Q9BXR3 956 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 NLNQ9BYT8 704 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 CENPHQ9H3R5 247 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 IPPKQ9H8X2 491 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 TXLNGQ9NUQ3 528 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ZFP69BQ9UJL9 534 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF490Q9ULM2 529 aaPredicted RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 LOC101059948A0A1B0GTJ6 334 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 A0A1B0GX78 115 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 OR7A17O14581 309 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 DSCR3O14972 297 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 TYROBPO43914 113 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 STATHP02808 62 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 MYZAPP0CAP1 466 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 MYL2P10916 166 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 CPA3P15088 417 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 ALAS2P22557 587 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 PWP1Q13610 501 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 COL9A2Q14055 689 aaPredicted RBP12.32□□□□□ -0.44
SMPD1-202ENST00000526280 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 UNC50Q53HI1 259 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 PAGE2BQ5JRK9 111 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF678Q5SXM1 525 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 C1orf189Q5VU69 101 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 LIPJQ5W064 366 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 LCN10Q6JVE6 187 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 FAM199XQ6PEV8 388 aaPredicted RBP12.32□□□□□ -0.44
SMPD1-202ENST00000526280 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 TRPV3Q8NET8 790 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 TTLQ8NG68 377 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF483Q8TF39 744 aaPredicted RBP12.32□□□□□ -0.44
SMPD1-202ENST00000526280 MR1Q95460 341 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 ARL8AQ96BM9 186 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 L3HYPDHQ96EM0 354 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 MOCOSQ96EN8 888 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 SEC16BQ96JE7 1060 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 C10orf90Q96M02 699 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 TMEM237Q96Q45 408 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 MACROD1Q9BQ69 325 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 IQCGQ9H095 443 aaKnown RBP12.32□□□□□ -0.44
SMPD1-202ENST00000526280 NOL11Q9H8H0 719 aaKnown RBP12.32□□□□□ -0.44
SMPD1-202ENST00000526280 ZBTB26Q9HCK0 441 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
SMPD1-202ENST00000526280 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 NDUFS4O43181 175 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 UGDHO60701 494 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 ONECUT2O95948 504 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 SLC35G6P0C7Q6 338 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 TCN2P20062 427 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 ITGAXP20702 1163 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 AGXTP21549 392 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 GSTM2P28161 218 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 HNF4AP41235 474 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CCNG1P51959 295 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CDH13P55290 713 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 DNAJB13P59910 316 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 DCDP81605 110 aaKnown RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 TLE3Q04726 772 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 FAM53BQ14153 422 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 HIST2H2ACQ16777 129 aaPredicted RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 NKAIN1Q4KMZ8 207 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 HIST2H2AA3Q6FI13 130 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 GRHL2Q6ISB3 625 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 TMEM214Q6NUQ4 689 aaKnown RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 RPS27LQ71UM5 84 aaKnown RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 VASH2Q86V25 355 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 L3MBTL4Q8NA19 623 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 KCT2Q8NC54 265 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 NT5CQ8TCD5 201 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CREB3L4Q8TEY5 395 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CT55Q8WUE5 264 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 UBE2E3Q969T4 207 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 MVB12AQ96EY5 273 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CCNL2Q96S94 520 aaPredicted RBP12.31□□□□□ -0.44
SMPD1-202ENST00000526280 NTMT1Q9BV86 223 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 CHST8Q9H2A9 424 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 RHBGQ9H310 441 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 ACTR8Q9H981 624 aa12.31□□□□□ -0.44
SMPD1-202ENST00000526280 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms