RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MROH9Q5TGP6 573 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ATG14Q6ZNE5 492 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ASB18Q6ZVZ8 466 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 TAOK1Q7L7X3 1001 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SPATA6LQ8N4H0 392 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 TRPV3Q8NET8 790 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 TTLQ8NG68 377 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 RHEBL1Q8TAI7 183 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SLC44A1Q8WWI5 657 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ISL2Q96A47 359 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 TSNARE1Q96NA8 513 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CRB3Q9BUF7 120 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SOX17Q9H6I2 414 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 SNX15Q9NRS6 342 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 WWOXQ9NZC7 414 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 NUDT4Q9NZJ9 180 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 CD274Q9NZQ7 290 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ZNF180Q9UJW8 692 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 PTBP2Q9UKA9 531 aaKnown RBP12.13□□□□□ -0.47
CLCN3-210ENST00000515420 ZNF451Q9Y4E5 1061 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
CLCN3-210ENST00000515420 DOCK10Q96BY6 2186 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 A0A087WUV0 522 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 A0A0A6YYC8 382 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 HMX2A2RU54 273 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 URADA6NGE7 173 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 NCF1BA6NI72 391 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 NCF1CA8MVU1 366 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 I3L1I5 382 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TAPBPO15533 448 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 NDUFS4O43181 175 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 STK16O75716 305 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 INHBAP08476 426 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ABHD2P08910 425 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 NCF1P14598 390 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TFEBP19484 476 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 IL10P22301 178 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 MEF2AQ02078 507 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 RBBP7Q16576 425 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ATG9BQ674R7 924 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 KIRREL2Q6UWL6 708 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 SLCO4C1Q6ZQN7 724 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TRMT10CQ7L0Y3 403 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TMPRSS11BQ86T26 416 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 CENPLQ8N0S6 344 aaPredicted RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 UBTD2Q8WUN7 234 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ATOH8Q96SQ7 321 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 PAFAH2Q99487 392 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 SMAD5Q99717 465 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TMEM79Q9BSE2 394 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 UNKQ9C0B0 810 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ALG9Q9H6U8 611 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 NT5DC2Q9H857 520 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 L2HGDHQ9H9P8 463 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 CLK4Q9HAZ1 481 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ANKHQ9HCJ1 492 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 ATP13A2Q9NQ11 1180 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 IGSF5Q9NSI5 407 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 DNAJC11Q9NVH1 559 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 GPR83Q9NYM4 423 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 C3orf18Q9UK00 162 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 IKBKGQ9Y6K9 419 aa12.12□□□□□ -0.47
CLCN3-210ENST00000515420 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
CLCN3-210ENST00000515420 SCN3AQ9NY46 2000 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 IDSB3KWA1 339 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 CLGNO14967 610 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 SLC28A2O43868 658 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
CLCN3-210ENST00000515420 KRT38O76015 456 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ALPPP05187 535 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 C2P06681 752 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 SERPINA6P08185 405 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 C1GALT1C1LP0DN25 315 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ACPPP15309 386 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 IL1RNP18510 177 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 TYK2P29597 1187 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 CASRP41180 1078 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 GDF5P43026 501 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 MAGEA12P43365 314 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 FOXL2P58012 376 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 PCDH1Q08174 1060 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 DLG1Q12959 904 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 BMPR2Q13873 1038 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 E2F2Q14209 437 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 MYBPC3Q14896 1274 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ACAP2Q15057 778 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms