RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CATSPEREQ5SY80 951 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 THOC6Q86W42 341 aaKnown RBP23.21■■□□□ 1.31
SNF8-213ENST00000514929 RBBP8Q99708 897 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 ILKAPQ9H0C8 392 aaPredicted RBP23.21■■□□□ 1.31
SNF8-213ENST00000514929 SLC22A14Q9Y267 594 aa23.21■■□□□ 1.31
SNF8-213ENST00000514929 SGK494L7N484 410 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 NDUFS4O43181 175 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 URI1O94763 535 aaPredicted RBP23.2■■□□□ 1.3
SNF8-213ENST00000514929 BMP10O95393 424 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 SERPIND1P05546 499 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 COX6A1P12074 109 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 MAGEA4P43358 317 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 HNMTP50135 292 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 PLEKHN1Q494U1 663 aaPredicted RBP23.2■■□□□ 1.3
SNF8-213ENST00000514929 MFSD4BQ5TF39 518 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 C8orf74Q6P047 294 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 ZDHHC24Q6UX98 284 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 NDUFAF7Q7L592 441 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 GPR22Q99680 433 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 SARGQ9BW04 601 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 UNKQ9C0B0 810 aaKnown RBP23.2■■□□□ 1.3
SNF8-213ENST00000514929 DERL2Q9GZP9 239 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 HCN3Q9P1Z3 774 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 KCNE2Q9Y6J6 123 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 NBASA2RRP1 2371 aa23.2■■□□□ 1.3
SNF8-213ENST00000514929 ASH1LQ9NR48 2969 aaKnown RBP23.19■■□□□ 1.3
SNF8-213ENST00000514929 PHGDHO43175 533 aaKnown RBP23.19■■□□□ 1.3
SNF8-213ENST00000514929 STMN1P16949 149 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 VARSP26640 1264 aaKnown RBP23.19■■□□□ 1.3
SNF8-213ENST00000514929 SLC7A5Q01650 507 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 Q0VFX4 171 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 PRR30Q53SZ7 412 aaPredicted RBP23.19■■□□□ 1.3
SNF8-213ENST00000514929 TMPRSS11BQ86T26 416 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 KBTBD2Q8IY47 623 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 IQCKQ8N0W5 287 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 PPM1NQ8N819 430 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 ZNF740Q8NDX6 193 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 OR51Q1Q8NH59 317 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 SLC22A7Q9Y694 548 aa23.19■■□□□ 1.3
SNF8-213ENST00000514929 JRKO75564 520 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 CCDC166P0CW27 439 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 STX2P32856 288 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 SPRP35270 261 aaPredicted RBP23.18■■□□□ 1.3
SNF8-213ENST00000514929 XCR1P46094 333 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 RGS1Q08116 209 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 PWP1Q13610 501 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 KBTBD12Q3ZCT8 623 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 MINDY4Q4G0A6 757 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 SPATA6LQ8N4H0 392 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 GALNT11Q8NCW6 608 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 METTL21AQ8WXB1 218 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 MOCOSQ96EN8 888 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 AIF1LQ9BQI0 150 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 SPNS1Q9H2V7 528 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 EPS8L2Q9H6S3 715 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 PELI2Q9HAT8 420 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 LRRC4CQ9HCJ2 640 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 RIC8BQ9NVN3 520 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 NAALAD2Q9Y3Q0 740 aa23.18■■□□□ 1.3
SNF8-213ENST00000514929 IGHV1-45A0A0A0MS14 117 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 A0A1W2PQ72 361 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 ESYT3A0FGR9 886 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 NCF1BA6NI72 391 aaPredicted RBP23.17■■□□□ 1.3
SNF8-213ENST00000514929 NCF1CA8MVU1 366 aaPredicted RBP23.17■■□□□ 1.3
SNF8-213ENST00000514929 RDH16O75452 317 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 KLHL18O94889 574 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 WDR47O94967 919 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 WISP3O95389 354 aaPredicted RBP23.17■■□□□ 1.3
SNF8-213ENST00000514929 C1QAP02745 245 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 C8orf89P0DMQ9 161 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 NCF1P14598 390 aaPredicted RBP23.17■■□□□ 1.3
SNF8-213ENST00000514929 SCTRP47872 440 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 HERC3Q15034 1050 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 GRTP1Q5TC63 336 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 NXPE4Q6UWF7 544 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 Q6ZS92 163 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 PDSS2Q86YH6 399 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 FBF1Q8TES7 1133 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 RHBDF1Q96CC6 855 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 WDR77Q9BQA1 342 aaPredicted RBP23.17■■□□□ 1.3
SNF8-213ENST00000514929 LRRC1Q9BTT6 524 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 VN1R1Q9GZP7 353 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 ZFP69BQ9UJL9 534 aa23.17■■□□□ 1.3
SNF8-213ENST00000514929 DOCK10Q96BY6 2186 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 LOC102723996A0A087X1L8 192 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 AHRP35869 848 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 RAB10P61026 200 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 SKP1P63208 163 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 REEP5Q00765 189 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 TGFBIQ15582 683 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 WHAMMP3Q1A5X7 153 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 TMEM205Q6UW68 189 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 IGFL2Q6UWQ7 119 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 ISLR2Q6UXK2 745 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 LINC00696Q6ZRV3 163 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 PPP4R1Q8TF05 950 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 ZNF592Q92610 1267 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 ZNF700Q9H0M5 742 aa23.16■■□□□ 1.3
SNF8-213ENST00000514929 FLNBO75369 2602 aaKnown RBP23.16■■□□□ 1.3
SNF8-213ENST00000514929 ZNF860A6NHJ4 632 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms