RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ALKBH2Q6NS38 261 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 LETMD1Q6P1Q0 360 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 FBXO42Q6P3S6 717 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 KLHL35Q6PF15 583 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 WDR74Q6RFH5 385 aaPredicted RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 NXPE4Q6UWF7 544 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 PRSS41Q7RTY9 318 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 SYVN1Q86TM6 617 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 PAQR7Q86WK9 346 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 NUDCD3Q8IVD9 361 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 MCATQ8IVS2 390 aaKnown RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.17□□□□□ -1.58
PROM1-211ENST00000511153 PRSS58Q8IYP2 241 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 CDYL2Q8N8U2 506 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 OR4F6Q8NGB9 312 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 OR1L3Q8NH93 324 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 RHEBL1Q8TAI7 183 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 ATL1Q8WXF7 558 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 SLC45A3Q96JT2 553 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 CNTNAP3BQ96NU0 1288 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 SORBS1Q9BX66 1292 aaKnown RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 SGPP1Q9BX95 441 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 RBCK1Q9BYM8 510 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 CNTNAP3Q9BZ76 1288 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 STRADBQ9C0K7 418 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 STMN4Q9H169 189 aaPredicted RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 ACBD3Q9H3P7 528 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 GSTO2Q9H4Y5 243 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 VIPAS39Q9H9C1 493 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 UCK1Q9HA47 277 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 PDE7BQ9NP56 450 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 MID1IP1Q9NPA3 183 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 GEMIN8Q9NWZ8 242 aaKnown RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 FOXJ2Q9P0K8 574 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 DHCR7Q9UBM7 475 aaKnown RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 MARCOQ9UEW3 520 aaPredicted RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 GIMAP2Q9UG22 337 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 PCDHGA1Q9Y5H4 931 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 B3GALT1Q9Y5Z6 326 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 FRYQ5TBA9 3013 aa5.17□□□□□ -1.58
PROM1-211ENST00000511153 MN1Q10571 1320 aaPredicted RBP5.17□□□□□ -1.58
PROM1-211ENST00000511153 MYOCOSA0A1B0GUC4 107 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 FAM221BA6H8Z2 402 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 TRABD2BA6NFA1 517 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ZNF839A8K0R7 811 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 RTCAO00442 366 aaKnown RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 PRPF4O43172 522 aaKnown RBP eCLIP5.16□□□□□ -1.58
PROM1-211ENST00000511153 SKAP2O75563 359 aaPredicted RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 CRCPO75575 148 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 CCNDBP1O95273 360 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ZBTB11O95625 1053 aaPredicted RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 TGFB1P01137 390 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 GBAP04062 536 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 C1GALT1C1LP0DN25 315 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 EPB42P16452 691 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 NR1D1P20393 614 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 IMPDH1P20839 514 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ALAS2P22557 587 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ETV4P43268 484 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 OR1D4P47884 311 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 HNMTP50135 292 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 CCR8P51685 355 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ERVPABLB-1P60509 514 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 RAB8AP61006 207 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 HERVK_113P63132 956 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 PPP2R2AP63151 447 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 HSD11B2P80365 405 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 CDKL1Q00532 357 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 NFKB2Q00653 900 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 CLCQ05315 142 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ZFP36L1Q07352 338 aaKnown RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 ILKQ13418 452 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ARHGAP19Q14CB8 494 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 TGIF1Q15583 401 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ZRSR2Q15696 482 aaKnown RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 SLC5A12Q1EHB4 618 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 HSP90B2PQ58FF3 399 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ARL13AQ5H913 290 aaPredicted RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 TOR1AIP1Q5JTV8 583 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 WASHC2DQ5SRD0 308 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 LIPMQ5VYY2 423 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 PWWP2BQ6NUJ5 590 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 FAM199XQ6PEV8 388 aaPredicted RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 LCTLQ6UWM7 567 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 SLCO4C1Q6ZQN7 724 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 SHISA6Q6ZSJ9 500 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 GPRIN3Q6ZVF9 776 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 LRRC70Q7Z2Q7 622 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ARHGAP22Q7Z5H3 698 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 MILR1Q7Z6M3 343 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ZFAND4Q86XD8 727 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 TCAIMQ8N3R3 496 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 DNAJC22Q8N4W6 341 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 CSNK1A1LQ8N752 337 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 AMER2Q8N7J2 671 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 ANKRD53Q8N9V6 530 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 KCT2Q8NC54 265 aa5.16□□□□□ -1.58
PROM1-211ENST00000511153 FBXO15Q8NCQ5 510 aaPredicted RBP5.16□□□□□ -1.58
PROM1-211ENST00000511153 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms