RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ASPGQ86U10 573 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ZFAND4Q86XD8 727 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 LSMEM2Q8N112 164 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 KRT78Q8N1N4 520 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 CDYL2Q8N8U2 506 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 L3MBTL4Q8NA19 623 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 SLC38A9Q8NBW4 561 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 KCT2Q8NC54 265 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 PPP1R14CQ8TAE6 165 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 SLC13A3Q8WWT9 602 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 CCT6BQ92526 530 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 RERGQ96A58 199 aaPredicted RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF285Q96NJ3 590 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 KCNA7Q96RP8 456 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 NTMT1Q9BV86 223 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 EHD1Q9H4M9 534 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 KLHL31Q9H511 634 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 MID1IP1Q9NPA3 183 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ASCL3Q9NQ33 180 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 DHCR7Q9UBM7 475 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 RUVBL1Q9Y265 456 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 BIRC5O15392 142 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 ZSCAN9O15535 394 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 SRPX2O60687 465 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 LYPLA1O75608 230 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 B3GALT4O96024 378 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 OTCP00480 354 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 MSL3P1P0C860 447 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 CHN1P15882 459 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 CXCR2P25025 360 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 SERPINB3P29508 390 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 FOXA1P55317 472 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 RAB15P59190 212 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 PPP2R2AP63151 447 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 RELAQ04206 551 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 ASPHQ12797 758 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 LCP2Q13094 533 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 LAPTM5Q13571 262 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 E2F2Q14209 437 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 PRTGQ2VWP7 1150 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 PAGE2BQ5JRK9 111 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 LIPJQ5W064 366 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 SCIMPQ6UWF3 145 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 GPR135Q8IZ08 494 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 TBC1D19Q8N5T2 526 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 METTL27Q8N6F8 245 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 OR7G3Q8NG95 312 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 ZCCHC10Q8TBK6 192 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 CREB3L4Q8TEY5 395 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 AGAP11Q8TF27 550 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 NXPE2Q96DL1 559 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 THAP11Q96EK4 314 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF382Q96SR6 550 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 DDA1Q9BW61 102 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 ULBP3Q9BZM4 244 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 AICDAQ9GZX7 198 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 NT5DC2Q9H857 520 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 AKIRIN1Q9H9L7 192 aaPredicted RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 FARSBQ9NSD9 589 aaKnown RBP12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 ZFP69BQ9UJL9 534 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 FIS1Q9Y3D6 152 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 TIMM22Q9Y584 194 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 AP1M2Q9Y6Q5 423 aa12.65□□□□□ -0.38
PDLIM7-212ENST00000504380 HYKKA2RU49 373 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 ANKDD1BA6NHY2 528 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 CDRT15L2A8MXV6 281 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 NDUFS4O43181 175 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 STK17BO94768 372 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 MLYCDO95822 493 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TBX6O95947 436 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TGFB1P01137 390 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 CAPN1P07384 714 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 ALAS2P22557 587 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 HTR6P50406 440 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC18A1P54219 525 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 HYAL2Q12891 473 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 RCN2Q14257 317 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 ARL13AQ5H913 290 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TCTE1Q5JU00 501 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM164Q5U3C3 297 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TTC19Q6DKK2 380 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 LCN10Q6JVE6 187 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TIPARPQ7Z3E1 657 aaKnown RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 LAS2Q8IYD9 372 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 SHISA5Q8N114 240 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 TTC29Q8NA56 475 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 OR6Y1Q8NGX8 325 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 OR8K5Q8NH50 307 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 AGR3Q8TD06 166 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 CLIP3Q96DZ5 547 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 CNDP1Q96KN2 507 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms