RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ZBTB14O43829 449 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 ZNF37AP17032 561 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 EMP3P54852 163 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 RELAQ04206 551 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 KLC1Q07866 573 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 VWA2Q5GFL6 755 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 CEP85LQ5SZL2 805 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 IGFL3Q6UXB1 125 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 HDXQ7Z353 690 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 VN1R4Q7Z5H5 301 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 CCDC91Q7Z6B0 441 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 CSNK1A1LQ8N752 337 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 AMER3Q8N944 861 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 OR11G2Q8NGC1 345 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 CPT1CQ8TCG5 803 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 STT3BQ8TCJ2 826 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 NACC2Q96BF6 587 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 ZIM3Q96PE6 472 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 ZNF304Q9HCX3 659 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 ABCF3Q9NUQ8 709 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 C5AR2Q9P296 337 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 CTNNAL1Q9UBT7 734 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 IKZF3Q9UKT9 509 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 ACOT9Q9Y305 439 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 SPTBN1Q01082 2364 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 HIVEP3Q5T1R4 2406 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 A0A096LPK6 155 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 H7BY64 318 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 RGS16O15492 202 aaPredicted RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 DPM1O60762 260 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 STATHP02808 62 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 C2P06681 752 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 ZGLP1P0C6A0 271 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 CCDC166P0CW27 439 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 PIM1P11309 404 aaPredicted RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 EZRP15311 586 aaKnown RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 TBPL1P62380 186 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 ABATP80404 500 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 ZNF844Q08AG5 666 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 UBAP2LQ14157 1087 aaKnown RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 CSHL1Q14406 222 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 NAA25Q14CX7 972 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 ZKSCAN8Q15776 578 aaPredicted RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 MUM1Q2TAK8 710 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 CRB2Q5IJ48 1285 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 PRMT9Q6P2P2 845 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 KLC3Q6P597 504 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 TMEM207Q6UWW9 146 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 LRIG3Q6UXM1 1119 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 PRSS58Q8IYP2 241 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 IQCKQ8N0W5 287 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 CLEC1AQ8NC01 280 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 PNPLA2Q96AD5 504 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 C19orf60Q96EN9 201 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 CABS1Q96KC9 395 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 PRAP1Q96NZ9 151 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 TRIM54Q9BYV2 358 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 ATP13A2Q9NQ11 1180 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 NXT1Q9UKK6 140 aaKnown RBP12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 CSAG2Q9Y5P2 127 aa12.06□□□□□ -0.48
SEC61A1-206ENST00000491668 HMX2A2RU54 273 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 ZNF839A8K0R7 811 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 IGHEP01854 428 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 ALDOAP04075 364 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 MYZAPP0CAP1 466 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 GNLYP22749 145 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 SLC26A3P40879 764 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 AIMP2Q13155 320 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 DSG2Q14126 1118 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 RASA2Q15283 850 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 SYT16Q17RD7 645 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 FAM83EQ2M2I3 478 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 ATG9BQ674R7 924 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 AGTRAPQ6RW13 159 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 FRA10AC1Q70Z53 315 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 HPS6Q86YV9 775 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 SPATA6LQ8N4H0 392 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 GOLGA6L1Q8N7Z2 621 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 GALNT11Q8NCW6 608 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 C8orf44Q96CB5 159 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 CCDC138Q96M89 665 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 MACROD1Q9BQ69 325 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 CRB3Q9BUF7 120 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 TMEM109Q9BVC6 243 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 ATG10Q9H0Y0 220 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 STMN4Q9H169 189 aaPredicted RBP12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 ACBD3Q9H3P7 528 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 PARVBQ9HBI1 364 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 SEMA3GQ9NS98 782 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 ZNF282Q9UDV7 671 aaPredicted RBP12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 UNC79Q9P2D8 2635 aa12.05□□□□□ -0.48
SEC61A1-206ENST00000491668 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 A0A0A6YYC8 382 aaPredicted RBP12.04□□□□□ -0.48
SEC61A1-206ENST00000491668 TCP11X1B4DZS4 312 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms