RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 DSCR3O14972 297 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 NKX2-8O15522 239 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 FOXS1O43638 330 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 KATNA1O75449 491 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 FURINP09958 794 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 C1GALT1C1LP0DN25 315 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 KRT15P19012 456 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 PEX19P40855 299 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 SCTRP47872 440 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 ARSFP54793 590 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 TMPRSS3P57727 454 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 ZNF844Q08AG5 666 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 VAC14Q08AM6 782 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 IFFO1Q0D2I5 559 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 DOC2AQ14183 400 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 SLBPQ14493 270 aaKnown RBP eCLIP7.48□□□□□ -1.21
SSR1-210ENST00000489567 NKAIN1Q4KMZ8 207 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 C1QTNF12Q5T7M4 302 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 BROXQ5VW32 411 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 ATG9BQ674R7 924 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 COX15Q7KZN9 410 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 LRRC70Q7Z2Q7 622 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 C4orf33Q8N1A6 199 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 TTC29Q8NA56 475 aaPredicted RBP7.48□□□□□ -1.21
SSR1-210ENST00000489567 MFSD9Q8NBP5 474 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 PROKR1Q8TCW9 393 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 STARD8Q92502 1023 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 RERGQ96A58 199 aaPredicted RBP7.48□□□□□ -1.21
SSR1-210ENST00000489567 SLC45A3Q96JT2 553 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 NSUN5Q96P11 429 aaKnown RBP7.48□□□□□ -1.21
SSR1-210ENST00000489567 MRPL57Q9BQC6 102 aaKnown RBP7.48□□□□□ -1.21
SSR1-210ENST00000489567 AICDAQ9GZX7 198 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 MRPL46Q9H2W6 279 aaKnown RBP7.48□□□□□ -1.21
SSR1-210ENST00000489567 ACTL8Q9H568 366 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 TXLNGQ9NUQ3 528 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 GPRC5BQ9NZH0 403 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 OPTCQ9UBM4 332 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 EPG5Q9HCE0 2579 aa7.48□□□□□ -1.21
SSR1-210ENST00000489567 A0A1B0GTL3 188 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 A8MT66 165 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 FFAR3O14843 346 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 GPR42O15529 346 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 NDUFS4O43181 175 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 DLX3O60479 287 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 KLF7O75840 302 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 WFS1O76024 890 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 TBX6O95947 436 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 B3GALT4O96024 378 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 TUBBP07437 444 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 HBQ1P09105 142 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 CREB1P16220 341 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 KRT4P19013 534 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 EEF1DP29692 281 aaKnown RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 GRK3P35626 688 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 DCDP81605 110 aaKnown RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 FOXK1P85037 733 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 HYAL2Q12891 473 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 CHIT1Q13231 466 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 IL10RAQ13651 578 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 NCF4Q15080 339 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 RBBP5Q15291 538 aaKnown RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 PCBP2Q15366 365 aaKnown RBP eCLIP7.47□□□□□ -1.214e-10■■■■■ 37.5
SSR1-210ENST00000489567 FAM214AQ32MH5 1076 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 HSP90B2PQ58FF3 399 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 XKR6Q5GH73 641 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 TMEM214Q6NUQ4 689 aaKnown RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 ZNF771Q7L3S4 317 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 GOLGA7Q7Z5G4 137 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 VN1R5Q7Z5H4 357 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 ASPGQ86U10 573 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 TRABD2AQ86V40 505 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.47□□□□□ -1.21
SSR1-210ENST00000489567 IQCKQ8N0W5 287 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 TEX9Q8N6V9 391 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 ENDOVQ8N8Q3 282 aaKnown RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 SLC13A3Q8WWT9 602 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 KIAA1143Q96AT1 154 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 THAP11Q96EK4 314 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 AIF1LQ9BQI0 150 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 NLNQ9BYT8 704 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 ALG2Q9H553 416 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 ZBTB26Q9HCK0 441 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 CTSFQ9UBX1 484 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 LGALS13Q9UHV8 139 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 ZNF490Q9ULM2 529 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 PCDHGA6Q9Y5G7 932 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 PKD1L2Q7Z442 2459 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 KMT2BQ9UMN6 2715 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 PTPRQQ9UMZ3 2332 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 A0A0A6YYC8 382 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 C21orf140B9A014 251 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 C4orf51C9J302 202 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 I3L1I5 382 aaPredicted RBP7.47□□□□□ -1.21
SSR1-210ENST00000489567 PPP6CO00743 305 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 OR7A17O14581 309 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 STX16O14662 325 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 DNAJB6O75190 326 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 ONECUT2O95948 504 aa7.47□□□□□ -1.21
SSR1-210ENST00000489567 SERPIND1P05546 499 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms