RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 BANPQ8N9N5 519 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 CCDC63Q8NA47 563 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 GALNT6Q8NCL4 622 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 PMEPA1Q969W9 287 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 ESAMQ96AP7 390 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 REPS1Q96D71 796 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 MVB12AQ96EY5 273 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 ERVK-6Q9BXR3 956 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 SSU72Q9NP77 194 aaKnown RBP11.88□□□□□ -0.51
COL4A5-206ENST00000489230 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 CUTCQ9NTM9 273 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 COPG2Q9UBF2 871 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 STK38LQ9Y2H1 464 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 PLLPQ9Y342 182 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
COL4A5-206ENST00000489230 A0A1B0GX78 115 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 H3BQF6 201 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 J3QKU1 62 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 DSCR3O14972 297 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 HCRTR1O43613 425 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 LCMT2O60294 686 aaKnown RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 DLX3O60479 287 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 PLIN3O60664 434 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 TIAF1O95411 115 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 CLDN9O95484 217 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 ONECUT2O95948 504 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 RECKO95980 971 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 ZNF28P17035 718 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 EEF1DP29692 281 aaKnown RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 STAT5AP42229 794 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 SCTRP47872 440 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 REEP5Q00765 189 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 MC1RQ01726 317 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 DOC2AQ14183 400 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 E2F2Q14209 437 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 PRTGQ2VWP7 1150 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 TTLL10Q6ZVT0 673 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 TIPARPQ7Z3E1 657 aaKnown RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 DSELQ8IZU8 1212 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 C4orf33Q8N1A6 199 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 MR1Q95460 341 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 APOPT1Q96IL0 206 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 CCNL2Q96S94 520 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 DRC3Q9H069 523 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 ACTR8Q9H981 624 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 VIPAS39Q9H9C1 493 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 CLK4Q9HAZ1 481 aaKnown RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 GEMIN8Q9NWZ8 242 aaKnown RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 NDOR1Q9UHB4 597 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 GPN3Q9UHW5 284 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-206ENST00000489230 PCDHGA11Q9Y5H2 935 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 SLC22A7Q9Y694 548 aa11.87□□□□□ -0.51
COL4A5-206ENST00000489230 PTPRQQ9UMZ3 2332 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 FEZF1A0PJY2 475 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 A8MT66 165 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 C9J4A7 227 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 E2F3O00716 465 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 SUPT7LO94864 414 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 MLYCDO95822 493 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 OTCP00480 354 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 ALBP02768 609 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 PROCP04070 461 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 SERPINA6P08185 405 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 RAB40ALP0C0E4 278 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 SBK3P0C264 359 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 H2AFXP16104 143 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 TCN2P20062 427 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 VARSP26640 1264 aaKnown RBP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 RORAP35398 523 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 BCL6P41182 706 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 AVPR1BP47901 424 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 CCNG1P51959 295 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 DNAJB13P59910 316 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 STXBP1P61764 594 aaKnown RBP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 TGM3Q08188 693 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 CLN3Q13286 438 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 SLBPQ14493 270 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 HERC3Q15034 1050 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 FBXO48Q5FWF7 155 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 CFAP157Q5JU67 520 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 MED27Q6P2C8 311 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 ZYG11AQ6WRX3 759 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 ZNF517Q6ZMY9 492 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 GOLGA7Q7Z5G4 137 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 MILR1Q7Z6M3 343 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 PLD3Q8IV08 490 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 SLC38A9Q8NBW4 561 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 NT5CQ8TCD5 201 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 NTMT1Q9BV86 223 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 RHBGQ9H310 441 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 NOL11Q9H8H0 719 aaKnown RBP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-206ENST00000489230 STARD5Q9NSY2 213 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 PSD3Q9NYI0 1048 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 SH2B3Q9UQQ2 575 aa11.86□□□□□ -0.51
COL4A5-206ENST00000489230 RUVBL1Q9Y265 456 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms