RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TGIF2Q9GZN2 237 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 DERL2Q9GZP9 239 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 SPNS1Q9H2V7 528 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 ZBTB20Q9HC78 741 aaPredicted RBP16.82■□□□□ 0.28
ITGB1-215ENST00000488494 SLAMF7Q9NQ25 335 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 DYRK1BQ9Y463 629 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 NBASA2RRP1 2371 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 ANKRD12Q6UB98 2062 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 HECTD1Q9ULT8 2610 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 TRBC2A0A5B9 178 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 H0YIG0 161 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 SGK494L7N484 410 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 RDH16O75452 317 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 JRKO75564 520 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 WISP3O95389 354 aaPredicted RBP16.81■□□□□ 0.28
ITGB1-215ENST00000488494 STX2P32856 288 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 MAGEA4P43358 317 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 EFNA3P52797 238 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 REEP5Q00765 189 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 CSHL1Q14406 222 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 SLMAPQ14BN4 828 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■■■ 49.2
ITGB1-215ENST00000488494 KBTBD12Q3ZCT8 623 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 MFSD4BQ5TF39 518 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 ATG9BQ674R7 924 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 PDSS2Q86YH6 399 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 SHISA5Q8N114 240 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 TBC1D19Q8N5T2 526 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 PPM1NQ8N819 430 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 OR4K1Q8NGD4 311 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 MOCOSQ96EN8 888 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 THOC3Q96J01 351 aaKnown RBP16.81■□□□□ 0.28
ITGB1-215ENST00000488494 LHPPQ9H008 270 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 ILKAPQ9H0C8 392 aaPredicted RBP16.81■□□□□ 0.28
ITGB1-215ENST00000488494 ANKHQ9HCJ1 492 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 MKL2Q9ULH7 1088 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 B3GNT3Q9Y2A9 372 aa16.81■□□□□ 0.28
ITGB1-215ENST00000488494 NSG1A0A0A6YYJ2 146 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 ZNF860A6NHJ4 632 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 NCF1BA6NI72 391 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-215ENST00000488494 NCF1CA8MVU1 366 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-215ENST00000488494 FAM155BO75949 473 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 KLHL18O94889 574 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 WDR47O94967 919 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 SERPIND1P05546 499 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 NCF1P14598 390 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-215ENST00000488494 STMN1P16949 149 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 CXCR2P25025 360 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 XCR1P46094 333 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 HNMTP50135 292 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 WHAMMP3Q1A5X7 153 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 C18orf21Q32NC0 220 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-215ENST00000488494 AGAP7PQ5VUJ5 663 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 IGFL3Q6UXB1 125 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 CYS1Q717R9 158 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 ZADH2Q8N4Q0 377 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 FBF1Q8TES7 1133 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 AGAP4Q96P64 663 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 LRRC1Q9BTT6 524 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 SARGQ9BW04 601 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 VN1R1Q9GZP7 353 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 PELI2Q9HAT8 420 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 LRRC4CQ9HCJ2 640 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 SLC22A14Q9Y267 594 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 NAALAD2Q9Y3Q0 740 aa16.8■□□□□ 0.28
ITGB1-215ENST00000488494 LRRK2Q5S007 2527 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 IGHV1-45A0A0A0MS14 117 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 A0A1W2PQ72 361 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 BMP10O95393 424 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 CCDC166P0CW27 439 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 UQCRFS1P47985 274 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 RAB10P61026 200 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 INPP5JQ15735 1006 aaPredicted RBP16.79■□□□□ 0.28
ITGB1-215ENST00000488494 ZKSCAN8Q15776 578 aaPredicted RBP16.79■□□□□ 0.28
ITGB1-215ENST00000488494 MINDY4Q4G0A6 757 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 NDUFAF7Q7L592 441 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 OR51Q1Q8NH59 317 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 RHBDF1Q96CC6 855 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 ZDHHC18Q9NUE0 388 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 RIC8BQ9NVN3 520 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 CSAG2Q9Y5P2 127 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 SLC22A7Q9Y694 548 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 KCNE2Q9Y6J6 123 aa16.79■□□□□ 0.28
ITGB1-215ENST00000488494 CTAGE15A4D2H0 777 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 PCDH17O14917 1159 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 VPS4BO75351 444 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 C8orf89P0DMQ9 161 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 CD1DP15813 335 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 SPRP35270 261 aaPredicted RBP16.78■□□□□ 0.28
ITGB1-215ENST00000488494 GMPRP36959 345 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 SCTRP47872 440 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 SLC6A12P48065 614 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 GUCY2DQ02846 1103 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 RGS1Q08116 209 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 NAB1Q13506 487 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 PWP1Q13610 501 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 HERC3Q15034 1050 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms