RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 AIMP2Q13155 320 aaKnown RBP10.94□□□□□ -0.66
CDHR3-205ENST00000468143 BMPR2Q13873 1038 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 MYBPC3Q14896 1274 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 ZKSCAN8Q15776 578 aaPredicted RBP10.94□□□□□ -0.66
CDHR3-205ENST00000468143 UAP1Q16222 522 aaPredicted RBP10.94□□□□□ -0.66
CDHR3-205ENST00000468143 MFSD4BQ5TF39 518 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 ATG9BQ674R7 924 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 NXPE4Q6UWF7 544 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 ADAMTSL2Q86TH1 951 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 PDSS2Q86YH6 399 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 GPSM1Q86YR5 675 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 ZC3H7AQ8IWR0 971 aaKnown RBP10.94□□□□□ -0.66
CDHR3-205ENST00000468143 CTAGE4Q8IX94 777 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 RBMXL3Q8N7X1 1067 aaKnown RBP10.94□□□□□ -0.66
CDHR3-205ENST00000468143 MNS1Q8NEH6 495 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 OR51Q1Q8NH59 317 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 EXT2Q93063 718 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 NACC2Q96BF6 587 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 RHBDF1Q96CC6 855 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 THOC3Q96J01 351 aaKnown RBP10.94□□□□□ -0.66
CDHR3-205ENST00000468143 ANKHQ9HCJ1 492 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 NINJ2Q9NZG7 142 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 CD274Q9NZQ7 290 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 MKL2Q9ULH7 1088 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 NAALAD2Q9Y3Q0 740 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 KCNE2Q9Y6J6 123 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 FER1L5A0AVI2 2057 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 ZNF462Q96JM2 2506 aa10.94□□□□□ -0.66
CDHR3-205ENST00000468143 H0YIG0 161 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 MAP2K7O14733 419 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 DPM1O60762 260 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 RDH16O75452 317 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 BMP10O95393 424 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 NSA2O95478 260 aaKnown RBP10.93□□□□□ -0.66
CDHR3-205ENST00000468143 SLC35G6P0C7Q6 338 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 C1GALT1C1LP0DN25 315 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 SCTRP47872 440 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 HSPA7P48741 367 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 HNMTP50135 292 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 RAB8AP61006 207 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 ATP6V0D1P61421 351 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 OLR1P78380 273 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 FOXK1P85037 733 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 ILF2Q12905 390 aaKnown RBP10.93□□□□□ -0.66
CDHR3-205ENST00000468143 MINDY4Q4G0A6 757 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 MROH9Q5TGP6 573 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 JMJD6Q6NYC1 403 aaPredicted RBP10.93□□□□□ -0.66
CDHR3-205ENST00000468143 TBC1D19Q8N5T2 526 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 OR5T3Q8NGG3 340 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 UHMK1Q8TAS1 419 aaKnown RBP10.93□□□□□ -0.66
CDHR3-205ENST00000468143 NXNL1Q96CM4 212 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 TRIM44Q96DX7 344 aaPredicted RBP10.93□□□□□ -0.66
CDHR3-205ENST00000468143 UBXN10Q96LJ8 280 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 AIF1LQ9BQI0 150 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 TMEM79Q9BSE2 394 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 RBCK1Q9BYM8 510 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 TGIF2Q9GZN2 237 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 KLHL31Q9H511 634 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 CLMPQ9H6B4 373 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 ALG9Q9H6U8 611 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 PELI2Q9HAT8 420 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 WWOXQ9NZC7 414 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 MTRF1LQ9UGC7 380 aaKnown RBP10.93□□□□□ -0.66
CDHR3-205ENST00000468143 ZFP69BQ9UJL9 534 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 RNF112Q9ULX5 631 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 PCDHGB7Q9Y5F8 929 aa10.93□□□□□ -0.66
CDHR3-205ENST00000468143 TNRC6AQ8NDV7 1962 aaKnown RBP10.92□□□□□ -0.66
CDHR3-205ENST00000468143 NSG1A0A0A6YYJ2 146 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 IGHV3-20A0A0C4DH32 117 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 H2AFYO75367 372 aaKnown RBP10.92□□□□□ -0.66
CDHR3-205ENST00000468143 KLHL18O94889 574 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 ACSL3O95573 720 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 HPP00738 406 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 TUBB4AP04350 444 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 ALPPP05187 535 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 CELA2AP08217 269 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 ZNF888P0CJ79 500 aaPredicted RBP10.92□□□□□ -0.66
CDHR3-205ENST00000468143 SLC35E2BP0CK96 405 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 COX6A1P12074 109 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 TFEBP19484 476 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 CRABP2P29373 138 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 XCR1P46094 333 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 SLC6A12P48065 614 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 SOX8P57073 446 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 REEP5Q00765 189 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 IRF9Q00978 393 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 PWP1Q13610 501 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
CDHR3-205ENST00000468143 DEFB134Q4QY38 66 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 PRR30Q53SZ7 412 aaPredicted RBP10.92□□□□□ -0.66
CDHR3-205ENST00000468143 IRAK1BP1Q5VVH5 260 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 SLC6A19Q695T7 634 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 SLCO4C1Q6ZQN7 724 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 LINC00696Q6ZRV3 163 aa10.92□□□□□ -0.66
CDHR3-205ENST00000468143 NDUFAF7Q7L592 441 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms