RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CPNE1Q99829 537 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 WDR77Q9BQA1 342 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 SARGQ9BW04 601 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 FAM129AQ9BZQ8 928 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 SPNS1Q9H2V7 528 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 EPS8L2Q9H6S3 715 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CAB39LQ9H9S4 337 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 ZBTB20Q9HC78 741 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 ANKHQ9HCJ1 492 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 RIC8BQ9NVN3 520 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 HCN3Q9P1Z3 774 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 MAP10Q9P2G4 905 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CTNNAL1Q9UBT7 734 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 VPS4AQ9UN37 437 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 DYRK1BQ9Y463 629 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 DOPEY2Q9Y3R5 2298 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 IGHV1-45A0A0A0MS14 117 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 TRBC2A0A5B9 178 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 ZNF860A6NHJ4 632 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 FAM159BA6NKW6 160 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 SGK494L7N484 410 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 PHGDHO43175 533 aaKnown RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 OR1F1O43749 312 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 LCMT2O60294 686 aaKnown RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 WISP3O95389 354 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 BMP10O95393 424 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 C1QAP02745 245 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 GSTA2P09210 222 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 C8orf89P0DMQ9 161 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 STX2P32856 288 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 GP5P40197 560 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 XCR1P46094 333 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 HNMTP50135 292 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 EFNA3P52797 238 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 GPX6P59796 221 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 POU4F1Q01851 419 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 Q0VFX4 171 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 CSHL1Q14406 222 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 USP10Q14694 798 aaKnown RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 SLMAPQ14BN4 828 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 INPP5JQ15735 1006 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 MINDY4Q4G0A6 757 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 CATSPEREQ5SY80 951 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 MFSD4BQ5TF39 518 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 ATG9BQ674R7 924 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 ZDHHC24Q6UX98 284 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 NDUFAF7Q7L592 441 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 THOC6Q86W42 341 aaKnown RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 PDSS2Q86YH6 399 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 CTAGE3PQ8IX95 158 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 KBTBD2Q8IY47 623 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 KCT2Q8NC54 265 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 GALNT11Q8NCW6 608 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 OR4K1Q8NGD4 311 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 GPR22Q99680 433 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 RBCK1Q9BYM8 510 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 SLC29A3Q9BZD2 475 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 UNKQ9C0B0 810 aaKnown RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 DERL2Q9GZP9 239 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 PELI2Q9HAT8 420 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 MKL2Q9ULH7 1088 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 SLC22A14Q9Y267 594 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 MTO1Q9Y2Z2 717 aaKnown RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 NAALAD2Q9Y3Q0 740 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
SF3A3-204ENST00000462258 USP9XQ93008 2570 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-204ENST00000462258 LOC102723996A0A087X1L8 192 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 ESYT3A0FGR9 886 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 NCF1BA6NI72 391 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 NCF1CA8MVU1 366 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 JRKO75564 520 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 KLHL18O94889 574 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 WDR47O94967 919 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 SERPIND1P05546 499 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 UQCRHP07919 91 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 CYC1P08574 325 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 NCF1P14598 390 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 STMN1P16949 149 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 GNLYP22749 145 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 SCTRP47872 440 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 SLC6A12P48065 614 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 SKP1P63208 163 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 RGS1Q08116 209 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 HERC3Q15034 1050 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 PCOLCEQ15113 449 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 TGFBIQ15582 683 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 TRADDQ15628 312 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 ZKSCAN8Q15776 578 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 KBTBD12Q3ZCT8 623 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 PLEKHN1Q494U1 663 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 TMEM205Q6UW68 189 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 IGFL2Q6UWQ7 119 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 LINC00696Q6ZRV3 163 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 Q6ZS92 163 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 CUZD1Q86UP6 607 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 SHISA5Q8N114 240 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 FAM26EQ8N5C1 309 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 PPM1NQ8N819 430 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms