RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 LRRC8EQ6NSJ5 796 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 HIBCHQ6NVY1 386 aaPredicted RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 RPUSD3Q6P087 351 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 NEK10Q6ZWH5 1172 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 PAQR7Q86WK9 346 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 CILP2Q8IUL8 1156 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 SRRM1Q8IYB3 904 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 TBC1D19Q8N5T2 526 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 CATSPER1Q8NEC5 780 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 CALML6Q8TD86 181 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 KCNJ9Q92806 393 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 MAGED4Q96JG8 741 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 PKP4Q99569 1192 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 TUBB6Q9BUF5 446 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 ZNF700Q9H0M5 742 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 PCBD2Q9H0N5 130 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 C20orf96Q9NUD7 363 aaPredicted RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 PLA2G3Q9NZ20 509 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 SEC14L3Q9UDX4 400 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 TRMT6Q9UJA5 497 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 SPENQ96T58 3664 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 FER1L5A0AVI2 2057 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 PCSK5Q92824 1860 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 FAM237BA0A1B0GVD1 139 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 OR5H15A6NDH6 313 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 SDR42E2A6NKP2 422 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 A8MUI8 341 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 HAT1O14929 419 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 PRAMEF2O60811 474 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 SEC24DO94855 1032 aaPredicted RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 UNC5CO95185 931 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 MED26O95402 600 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 WDPCPO95876 746 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 CYC1P08574 325 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 SLC35G6P0C7Q6 338 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 MPC1LP0DKB6 136 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 SLC26A3P40879 764 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 KCNJ1P48048 391 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 AGTR2P50052 363 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 TAS2R50P59544 299 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 RPS15AP62244 130 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 MAT1AQ00266 395 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 RELAQ04206 551 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 PTK6Q13882 451 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 FAM53BQ14153 422 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 GBX1Q14549 363 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 BTBD16Q32M84 506 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 UGT3A1Q6NUS8 523 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 FBXO42Q6P3S6 717 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 RPTNQ6XPR3 784 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 UBE2R2Q712K3 238 aaPredicted RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 C17orf64Q86WR6 236 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 PLD3Q8IV08 490 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 ZC3H7AQ8IWR0 971 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 LMNTD2Q8IXW0 634 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 HORMAD2Q8N7B1 307 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 AMER3Q8N944 861 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 PRELID2Q8N945 189 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 CAMKVQ8NCB2 501 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 FBXO15Q8NCQ5 510 aaPredicted RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 PPFIBP2Q8ND30 876 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 OR9A4Q8NGU2 314 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 ZCCHC10Q8TBK6 192 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 ZNF480Q8WV37 535 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 HAS2Q92819 552 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 ALKBH8Q96BT7 664 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 OR2A5Q96R48 311 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 NAP1L3Q99457 506 aaPredicted RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 MESP1Q9BRJ9 268 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 TRIM56Q9BRZ2 755 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 FAM167BQ9BTA0 163 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 FAM129AQ9BZQ8 928 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 TGIF2Q9GZN2 237 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 RNF32Q9H0A6 362 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 ANKHQ9HCJ1 492 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 FBXO6Q9NRD1 293 aaPredicted RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 HCN3Q9P1Z3 774 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 KLHL42Q9P2K6 505 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 DMGDHQ9UI17 866 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 SH3BGRL2Q9UJC5 107 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 COMMD10Q9Y6G5 202 aa7.35□□□□□ -1.23
VPS50-204ENST00000438395 TEP1Q99973 2627 aaKnown RBP7.35□□□□□ -1.23
VPS50-204ENST00000438395 POLQO75417 2590 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.34□□□□□ -1.23
VPS50-204ENST00000438395 LOC102723996A0A087X1L8 192 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 IGKV1-8A0A0C4DH67 115 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 GOLGA6L10A0A0M3HER8 536 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 A0A1W2PQ72 361 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 E7ENX8 843 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 FAM227AF5H4B4 570 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 H0YIG0 161 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 GOLGA8MH3BSY2 632 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 H7BY64 318 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 EIF3FO00303 357 aaPredicted RBP7.34□□□□□ -1.23
VPS50-204ENST00000438395 CCL21O00585 134 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 P2RX6O15547 441 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 TTI1O43156 1089 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 KIF5CO60282 957 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 AVILO75366 819 aa7.34□□□□□ -1.23
VPS50-204ENST00000438395 NSA2O95478 260 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms