RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 HNMTP50135 292 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 CDKL1Q00532 357 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 USP10Q14694 798 aaKnown RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 TSNQ15631 228 aaKnown RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 ZXDCQ2QGD7 858 aaPredicted RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 MINDY4Q4G0A6 757 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 C8orf74Q6P047 294 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 PRSS41Q7RTY9 318 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 TMPRSS11BQ86T26 416 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 THOC6Q86W42 341 aaKnown RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 KBTBD2Q8IY47 623 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 KCT2Q8NC54 265 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 FBXO25Q8TCJ0 367 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 ANKRD49Q8WVL7 239 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 NEIL2Q969S2 332 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 OR4K3Q96R72 315 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 SCN2AQ99250 2005 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 RBBP8Q99708 897 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 WDR77Q9BQA1 342 aaPredicted RBP16.66■□□□□ 0.26
NUP50-208ENST00000430547 SMYD2Q9NRG4 433 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 HCN3Q9P1Z3 774 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 KCNE2Q9Y6J6 123 aa16.66■□□□□ 0.26
NUP50-208ENST00000430547 CXorf49A8MYA2 514 aaPredicted RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 SGK494L7N484 410 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 BMP10O95393 424 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 C8orf89P0DMQ9 161 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 COX6A1P12074 109 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 STX2P32856 288 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 XCR1P46094 333 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 AP2B1P63010 937 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 RGS1Q08116 209 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 PWP1Q13610 501 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 HERC3Q15034 1050 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 PLEKHN1Q494U1 663 aaPredicted RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 PRR30Q53SZ7 412 aaPredicted RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 CATSPEREQ5SY80 951 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 CYS1Q717R9 158 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 ZNF572Q7Z3I7 529 aaPredicted RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 OR4K1Q8NGD4 311 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 OR51Q1Q8NH59 317 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 PPP4R1Q8TF05 950 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 AIF1LQ9BQI0 150 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 MESP1Q9BRJ9 268 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 MCMBPQ9BTE3 642 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 SARGQ9BW04 601 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 DERL2Q9GZP9 239 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 CAB39LQ9H9S4 337 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 PELI2Q9HAT8 420 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 ZBTB20Q9HC78 741 aaPredicted RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 C19orf25Q9UFG5 118 aaPredicted RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 SLC22A14Q9Y267 594 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 MTO1Q9Y2Z2 717 aaKnown RBP16.65■□□□□ 0.26
NUP50-208ENST00000430547 SLC22A7Q9Y694 548 aa16.65■□□□□ 0.26
NUP50-208ENST00000430547 CNTRLQ7Z7A1 2325 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 IGHV1-45A0A0A0MS14 117 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 NCF1BA6NI72 391 aaPredicted RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 FAM159BA6NKW6 160 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 NCF1CA8MVU1 366 aaPredicted RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 RDH16O75452 317 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 KLHL18O94889 574 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 WDR47O94967 919 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 CYC1P08574 325 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 NCF1P14598 390 aaPredicted RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 SPRP35270 261 aaPredicted RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 MAGEA4P43358 317 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 Q0VFX4 171 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 UBAP2LQ14157 1087 aaKnown RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 NIPAL1Q6NVV3 410 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 ISLR2Q6UXK2 745 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 Q6ZS92 163 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 CNDP1Q96KN2 507 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 GPR22Q99680 433 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 UNKQ9C0B0 810 aaKnown RBP16.64■□□□□ 0.25
NUP50-208ENST00000430547 ZFP69BQ9UJL9 534 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 NAALAD2Q9Y3Q0 740 aa16.64■□□□□ 0.25
NUP50-208ENST00000430547 DOPEY2Q9Y3R5 2298 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 CPAMD8Q8IZJ3 1885 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 ESPL1Q14674 2120 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 URADA6NGE7 173 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 PHGDHO43175 533 aaKnown RBP16.63■□□□□ 0.25
NUP50-208ENST00000430547 JRKO75564 520 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 PRR35P0CG20 571 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 ICAM2P13598 275 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 GNLYP22749 145 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 AHRP35869 848 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 UQCRFS1P47985 274 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 GLRBP48167 497 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 GPX6P59796 221 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 SNRPNP63162 240 aaKnown RBP16.63■□□□□ 0.25
NUP50-208ENST00000430547 REEP5Q00765 189 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 MFAP5Q13361 173 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 SLMAPQ14BN4 828 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 RBBP5Q15291 538 aaKnown RBP16.63■□□□□ 0.25
NUP50-208ENST00000430547 KBTBD12Q3ZCT8 623 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 CRB2Q5IJ48 1285 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 GRTP1Q5TC63 336 aa16.63■□□□□ 0.25
NUP50-208ENST00000430547 LINC00696Q6ZRV3 163 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms