RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 SLBPQ14493 270 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP40-205ENST00000430158 XKR6Q5GH73 641 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 ADNP2Q6IQ32 1131 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 ADCK2Q7Z695 626 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 PROSER1Q86XN7 944 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 TMEM126BQ8IUX1 230 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 SLC22A9Q8IVM8 553 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 LAS2Q8IYD9 372 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 DSELQ8IZU8 1212 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 AFAP1L2Q8N4X5 818 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 DTWD1Q8N5C7 304 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 GALNT6Q8NCL4 622 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 ARMC2Q8NEN0 867 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 OR52B6Q8NGF0 335 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 FAM111AQ96PZ2 611 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 MACROD1Q9BQ69 325 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 AIF1LQ9BQI0 150 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 EFCAB11Q9BUY7 163 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 RHBGQ9H310 441 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 GSTO2Q9H4Y5 243 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 NOL11Q9H8H0 719 aaKnown RBP11.84□□□□□ -0.51
USP40-205ENST00000430158 IPPKQ9H8X2 491 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
USP40-205ENST00000430158 ARGLU1Q9NWB6 273 aaPredicted RBP11.84□□□□□ -0.51
USP40-205ENST00000430158 ZFP69BQ9UJL9 534 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 TSC22D4Q9Y3Q8 395 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 CACNA1BQ00975 2339 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 CFAP47Q6ZTR5 3102 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 HYKKA2RU49 373 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 STMND1H3BQB6 276 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 MEN1O00255 615 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 CLGNO14967 610 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 FOXS1O43638 330 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 OR1F1O43749 312 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 RAD1O60671 282 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 UGDHO60701 494 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 CPNE3O75131 537 aaKnown RBP11.83□□□□□ -0.52
USP40-205ENST00000430158 STATHP02808 62 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 MYZAPP0CAP1 466 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 SMIM10L1P0DMW3 83 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 MYL2P10916 166 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 LIPCP11150 499 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 PIK3CGP48736 1102 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 CDH13P55290 713 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 PCBP4P57723 403 aaKnown RBP11.83□□□□□ -0.52
USP40-205ENST00000430158 IRF8Q02556 426 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 PWP1Q13610 501 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 GRM7Q14831 915 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 AGBL2Q5U5Z8 902 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 YOD1Q5VVQ6 348 aaPredicted RBP11.83□□□□□ -0.52
USP40-205ENST00000430158 LIPJQ5W064 366 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 CES4AQ5XG92 561 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 FAM219BQ5XKK7 198 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 GRHL2Q6ISB3 625 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 TMEM214Q6NUQ4 689 aaKnown RBP11.83□□□□□ -0.52
USP40-205ENST00000430158 C6orf15Q6UXA7 325 aaPredicted RBP11.83□□□□□ -0.52
USP40-205ENST00000430158 TMIGD1Q6UXZ0 262 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 ATG14Q6ZNE5 492 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 ASPGQ86U10 573 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 C10orf107Q8IVU9 208 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.83□□□□□ -0.52
USP40-205ENST00000430158 GPR135Q8IZ08 494 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 NT5CQ8TCD5 201 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 SMIM10Q96HG1 83 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 CUTCQ9NTM9 273 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 DHCR7Q9UBM7 475 aaKnown RBP11.83□□□□□ -0.52
USP40-205ENST00000430158 RAXQ9Y2V3 346 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 RNF11Q9Y3C5 154 aa11.83□□□□□ -0.52
USP40-205ENST00000430158 UQCRHLA0A096LP55 91 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 LOC101059948A0A1B0GTJ6 334 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 C4orf51C9J302 202 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 H0YIV9 168 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 UBFD1O14562 309 aaKnown RBP11.82□□□□□ -0.52
USP40-205ENST00000430158 DSCR3O14972 297 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 EFSO43281 561 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 H2AFYO75367 372 aaKnown RBP11.82□□□□□ -0.52
USP40-205ENST00000430158 UQCRHP07919 91 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 HBQ1P09105 142 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 TSPAN8P19075 237 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 WT1P19544 449 aaPredicted RBP11.82□□□□□ -0.52
USP40-205ENST00000430158 F8A1P23610 371 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 CXCR2P25025 360 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 ALDH3A1P30838 453 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 ARRB2P32121 409 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 GRK3P35626 688 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 HNF4AP41235 474 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 STAT5AP42229 794 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 SLC18A1P54219 525 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 NAGLUP54802 743 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 CLCQ05315 142 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 ABHD18Q0P651 414 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 LAPTM5Q13571 262 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 ADPRMQ3LIE5 342 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 GGTA1PQ4G0N0 100 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 TTMPQ5BVD1 217 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 MANEAQ5SRI9 462 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 GARNL3Q5VVW2 1013 aa11.82□□□□□ -0.52
USP40-205ENST00000430158 LETMD1Q6P1Q0 360 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms