RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 H1FNTQ75WM6 255 aaPredicted RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 MTSS1LQ765P7 747 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 HDDC2Q7Z4H3 204 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RTN4RL1Q86UN2 441 aaPredicted RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 HIPK1Q86Z02 1210 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 CCDC71Q8IV32 467 aaPredicted RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ARHGEF19Q8IW93 802 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 MICU2Q8IYU8 434 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ADGRF2Q8IZF7 708 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 UNC5BQ8IZJ1 945 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 MCOLN2Q8IZK6 566 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ADGRG2Q8IZP9 1017 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 CLYBLQ8N0X4 340 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 SLC15A4Q8N697 577 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 C12orf29Q8N999 325 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 C19orf47Q8N9M1 422 aaKnown RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 TERB1Q8NA31 727 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GLIS1Q8NBF1 620 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 NHLRC2Q8NBF2 726 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 SUMF1Q8NBK3 374 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 UXS1Q8NBZ7 420 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 CPEB3Q8NE35 698 aaKnown RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 OR4D6Q8NGJ1 314 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 IL31RAQ8NI17 732 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 UBA3Q8TBC4 463 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 SLC2A14Q8TDB8 520 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GTF3AQ92664 365 aaKnown RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ESR2Q92731 530 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 COPS5Q92905 334 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 TCEAL3Q969E4 200 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GAL3ST3Q96A11 431 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 C3orf49Q96BT1 292 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 REPS1Q96D71 796 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ALG14Q96F25 216 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 DYDC2Q96IM9 177 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 PLEKHA8Q96JA3 519 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 SIGLEC10Q96LC7 697 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 Q96M66 194 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ZIM3Q96PE6 472 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 CSPG4P5Q96PW8 444 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 DPYSL5Q9BPU6 564 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 C17orf62Q9BQA9 187 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 TMEM79Q9BSE2 394 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ZNF577Q9BSK1 485 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 KIFC1Q9BW19 673 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 PHF7Q9BWX1 381 aaPredicted RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 HINT2Q9BX68 163 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 PARD6GQ9BYG4 376 aaPredicted RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 WDR11Q9BZH6 1224 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RTN4RQ9BZR6 473 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 CCDC90BQ9GZT6 254 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 HOXD1Q9GZZ0 328 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GANQ9H2C0 597 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 HIPK2Q9H2X6 1198 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 LRRN3Q9H3W5 708 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ABHD16BQ9H3Z7 469 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 PRDM13Q9H4Q3 707 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 L2HGDHQ9H9P8 463 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RPF1Q9H9Y2 349 aaKnown RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RNPEPL1Q9HAU8 725 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 MAGEF1Q9HAY2 307 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 FOLH1BQ9HBA9 442 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GPN1Q9HCN4 374 aaPredicted RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 MLXIPLQ9NP71 852 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 LTB4R2Q9NPC1 389 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ASCL3Q9NQ33 180 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 XPNPEP1Q9NQW7 623 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 SAMSN1Q9NSI8 373 aaKnown RBP3.82□□□□□ -1.8
LINC01048-201ENST00000414480 SACM1LQ9NTJ5 587 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 ZDHHC18Q9NUE0 388 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 FAM118AQ9NWS6 357 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 TAS2R1Q9NYW7 299 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GCNT4Q9P109 453 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 MLXQ9UH92 298 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 GPR160Q9UJ42 338 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 STOML2Q9UJZ1 356 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RAB23Q9ULC3 237 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 CA14Q9ULX7 337 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 PYCARDQ9ULZ3 195 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 VWA7Q9Y334 891 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 STARD10Q9Y365 291 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 TRAF6Q9Y4K3 522 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RIPK3Q9Y572 518 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 PCDHGB1Q9Y5G3 927 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 IRAK3Q9Y616 596 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 RAD54BQ9Y620 910 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 U3KQV3 271 aa3.82□□□□□ -1.8
LINC01048-201ENST00000414480 TANC1Q9C0D5 1861 aa3.81□□□□□ -1.8
LINC01048-201ENST00000414480 COL11A1P12107 1806 aaPredicted RBP3.81□□□□□ -1.8
LINC01048-201ENST00000414480 FRYLO94915 3013 aa3.81□□□□□ -1.8
LINC01048-201ENST00000414480 FRYQ5TBA9 3013 aa3.81□□□□□ -1.8
LINC01048-201ENST00000414480 FAM230AA0A1W2PPH8 454 aa3.81□□□□□ -1.8
LINC01048-201ENST00000414480 TCRBV16S1A1N1A0A5B0 115 aa3.81□□□□□ -1.8
LINC01048-201ENST00000414480 VPS37CA5D8V6 355 aaPredicted RBP3.81□□□□□ -1.8
LINC01048-201ENST00000414480 OR14I1A6ND48 311 aa3.81□□□□□ -1.8
LINC01048-201ENST00000414480 OR2AT4A6NND4 320 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms