RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 ARHGEF33A8MVX0 844 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZBTB42B2RXF5 422 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 NPIPA5E9PKD4 350 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 BTN3A3O00478 584 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 KHDRBS3O75525 346 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 C8orf89P0DMQ9 161 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ACVR2AP27037 513 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CD6P30203 668 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 HOXC13P31276 330 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SLC6A9P48067 706 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GALK1P51570 392 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MTTPP55157 894 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 TBPL1P62380 186 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PPP3R1P63098 170 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MRPS21P82921 87 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 TCEAL1Q15170 157 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SLC44A4Q53GD3 710 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MPP7Q5T2T1 576 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 UBAP2Q5T6F2 1119 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 DNM1P34Q6PK57 102 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ANKRD33Q7Z3H0 272 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GSTCDQ8NEC7 633 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 OR6K6Q8NGW6 343 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ATOH1Q92858 354 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 DAZLQ92904 295 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GTPBP3Q969Y2 492 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 FIZ1Q96SL8 496 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ASPNQ9BXN1 380 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF358Q9NW07 568 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 NPIPA1Q9UND3 350 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 NUMBLQ9Y6R0 609 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 DDX60LQ5H9U9 1706 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 HIDE1A8MVS5 230 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PGRMC2O15173 223 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GADD45GO95257 159 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF3P17036 446 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PTDSS1P48651 473 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CCT3P49368 545 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SMU1Q2TAY7 513 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MSS51Q4VC12 460 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SLC9B1Q4ZJI4 515 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 LIPJQ5W064 366 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 AAGABQ6PD74 315 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CEACAM20Q6UY09 585 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 LRRC69Q6ZNQ3 347 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 TICAM1Q8IUC6 712 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZDHHC21Q8IVQ6 265 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 C3orf58Q8NDZ4 430 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GEMIN6Q8WXD5 167 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MRPS26Q9BYN8 205 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CPEB1Q9BZB8 566 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 AKTIPQ9H8T0 292 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PLGRKTQ9HBL7 147 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZFR2Q9UPR6 939 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CLIC1O00299 241 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 RSL1D1O76021 490 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PROS1P07225 676 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 LYNP07948 512 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ENGP17813 658 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 OTX2P32243 289 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 OR4D2P58180 307 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SRP54P61011 504 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 RAB14P61106 215 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MEF2AQ02078 507 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 NR0B2Q15466 257 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZSWIM7Q19AV6 140 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ACSBG2Q5FVE4 666 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SVOPLQ8N434 492 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 RBM15BQ8NDT2 890 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 KLF16Q9BXK1 252 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 LRRC3Q9BY71 257 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 HCSTQ9UBK5 93 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ARAP2Q8WZ64 1704 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 IQCMA0A1B0GVH7 501 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 FAM92AA1XBS5 289 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GLOD5A6NK44 160 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MT-ND1P03886 318 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GBAP04062 536 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 OLR1P78380 273 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CD47Q08722 323 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 RASGEF1BQ0VAM2 473 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 TDGQ13569 410 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CAMK1Q14012 370 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GRM7Q14831 915 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 GFOD2Q3B7J2 385 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 PQLC1Q8N2U9 271 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 NXPE3Q969Y0 559 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ISG20Q96AZ6 181 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 MOAP1Q96BY2 351 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 SCRN2Q96FV2 425 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CRELD1Q96HD1 420 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 FAM120CQ9NX05 1096 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 THSD7AQ9UPZ6 1657 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 CPSF4LA6NMK7 179 aaKnown RBP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 HMGCLP35914 325 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ERVFC1P60507 584 aa4.82□□□□□ -1.64
HDAC9-204ENST00000406451 TARDBPQ13148 414 aaKnown RBP eCLIP4.82□□□□□ -1.64
HDAC9-204ENST00000406451 ZDHHC24Q6UX98 284 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms