RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 RELAQ04206 551 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 FZD5Q13467 585 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 DDX39BQ13838 428 aaKnown RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 DOC2AQ14183 400 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 IMPG1Q17R60 797 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 RSPO4Q2I0M5 234 aaPredicted RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 CATSPEREQ5SY80 951 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 IL23RQ5VWK5 629 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 ADNP2Q6IQ32 1131 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 CAPN13Q6MZZ7 669 aaPredicted RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 OGFOD2Q6N063 350 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 LAYNQ6UX15 382 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 SYT13Q7L8C5 426 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 TRIM69Q86WT6 500 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 CHERPQ8IWX8 916 aaKnown RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 DEFB119Q8N690 84 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 L3MBTL4Q8NA19 623 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 TSTD1Q8NFU3 115 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 OR56A3Q8NH54 315 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 USP7Q93009 1102 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 NEIL2Q969S2 332 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 CCDC124Q96CT7 223 aaKnown RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 PDXPQ96GD0 296 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 ZNF597Q96LX8 424 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 C12orf66Q96MD2 445 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 CGREF1Q99674 301 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 DOK1Q99704 481 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 ACAT2Q9BWD1 397 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 GPR174Q9BXC1 333 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 ACPTQ9BZG2 426 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 TPSD1Q9BZJ3 242 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 EFCAB1Q9HAE3 211 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 SGK2Q9HBY8 427 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 PRDM8Q9NQV8 689 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 PNPLA3Q9NST1 481 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 IMP3Q9NV31 184 aaKnown RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 DDX18Q9NVP1 670 aaKnown RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 AIG1Q9NVV5 245 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 USP36Q9P275 1121 aaKnown RBP6.69□□□□□ -1.34
RTN4-205ENST00000394609 SNX6Q9UNH7 406 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 KCNE2Q9Y6J6 123 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 COL4A2P08572 1712 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 KNL1Q8NG31 2342 aa6.69□□□□□ -1.34
RTN4-205ENST00000394609 GPR89AB7ZAQ6 455 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 SLC28A1O00337 649 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 SEC22BO75396 215 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 SLC22A3O75751 556 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 BCAS2O75934 225 aaPredicted RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 IGHV4-34P06331 123 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 GPR89BP0CG08 455 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 PCSK6P29122 969 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 MSX2P35548 267 aaPredicted RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 ATP4BP51164 291 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 PNLIPRP1P54315 467 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 ESRRGP62508 458 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 RPL38P63173 70 aaKnown RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 MEF2AQ02078 507 aaPredicted RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 EMX2Q04743 252 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 STX5Q13190 355 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 CLCA4Q14CN2 919 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 FRG2Q64ET8 278 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 REP15Q6BDI9 236 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 UNC5DQ6UXZ4 953 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 GCNT7Q6ZNI0 430 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 LINC00299Q6ZSB3 139 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 Q6ZSR6 202 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 LPCAT2Q7L5N7 544 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 TMPRSS11BQ86T26 416 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 CARM1Q86X55 608 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 HPS6Q86YV9 775 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 DCUN1D3Q8IWE4 304 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 PGAM4Q8N0Y7 254 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 PACRGLQ8N7B6 248 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 RNF148Q8N7C7 305 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 SCAIQ8N9R8 606 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 FBXO15Q8NCQ5 510 aaPredicted RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 TNIP2Q8NFZ5 429 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 OR5K2Q8NHB8 316 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 CCL4L1Q8NHW4 92 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 ASB12Q8WXK4 309 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 OR1E3Q8WZA6 343 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 ABTB1Q969K4 478 aaPredicted RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 VPS33AQ96AX1 596 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 RAD51AP1Q96B01 352 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 EFHD2Q96C19 240 aaPredicted RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 BIRC7Q96CA5 298 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 PPP3R2Q96LZ3 170 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 FRG2BQ96QU4 278 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 FERD3LQ96RJ6 166 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 CDRT15Q96T59 188 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 MTERF1Q99551 399 aaKnown RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 PRPF18Q99633 342 aaKnown RBP6.68□□□□□ -1.34
RTN4-205ENST00000394609 SLC29A3Q9BZD2 475 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 WDR41Q9HAD4 459 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 IL1RL2Q9HB29 575 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 LRTM1Q9HBL6 345 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 LTB4R2Q9NPC1 389 aa6.68□□□□□ -1.34
RTN4-205ENST00000394609 ACSL5Q9ULC5 683 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms