RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SH2B3Q9UQQ2 575 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 ASB1Q9Y576 335 aa14.47□□□□□ -0.09
CHMP3-202ENST00000393773 KCNE1BA0A087WTH5 132 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 E9PLN8 166 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 H7BY64 318 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 SGK494L7N484 410 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 ASNA1O43681 348 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 RDH16O75452 317 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 SP1P08047 785 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 CD46P15529 392 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 ABOP16442 354 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF24P17028 368 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 IGFBP2P18065 325 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 CHRM3P20309 590 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 BCL6P41182 706 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 NPY2RP49146 381 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 RPS15AP62244 130 aaKnown RBP14.46□□□□□ -0.09
CHMP3-202ENST00000393773 TBPL1P62380 186 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 CSNK1G2P78368 415 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 BASP1P80723 227 aaKnown RBP14.46□□□□□ -0.09
CHMP3-202ENST00000393773 CUL1Q13616 776 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 USP10Q14694 798 aaKnown RBP14.46□□□□□ -0.09
CHMP3-202ENST00000393773 SFT2D3Q587I9 215 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF468Q5VIY5 522 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-202ENST00000393773 C3P1Q6ZMU1 363 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 DOLPP1Q86YN1 238 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 CILP2Q8IUL8 1156 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 TMEM139Q8IV31 216 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 LGI4Q8N135 537 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 GHDCQ8N2G8 530 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 ZCCHC10Q8TBK6 192 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 CHTF18Q8WVB6 975 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 TSLPQ969D9 159 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 PRAP1Q96NZ9 151 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 VKORC1Q9BQB6 163 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 RBCK1Q9BYM8 510 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 LANCL2Q9NS86 450 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 BFARQ9NZS9 450 aa14.46□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF407Q9C0G0 2248 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 E5RI56 91 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 GFYI3L273 518 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 NME2P1O60361 137 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 TSPAN12O95859 305 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 SYF2O95926 243 aaKnown RBP14.45□□□□□ -0.1
CHMP3-202ENST00000393773 F7P08709 466 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-202ENST00000393773 NME2P22392 152 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 SLC26A5P58743 744 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 ABRAXAS2Q15018 415 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 MEX3BQ6ZN04 569 aaKnown RBP14.45□□□□□ -0.1
CHMP3-202ENST00000393773 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-202ENST00000393773 SDCCAG8Q86SQ7 713 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-202ENST00000393773 ZNF227Q86WZ6 799 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 SLC5A8Q8N695 610 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 PRELID2Q8N945 189 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 FAM98AQ8NCA5 519 aaKnown RBP14.45□□□□□ -0.1
CHMP3-202ENST00000393773 ASB11Q8WXH4 323 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 TM4SF19Q96DZ7 209 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 CCDC138Q96M89 665 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 DESI2Q9BSY9 194 aa14.45□□□□□ -0.1
CHMP3-202ENST00000393773 DNAJC13O75165 2243 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 PFDN6O15212 129 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 SLC25A12O75746 678 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 CDC123O75794 336 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 MPC1LP0DKB6 136 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 TPSB2P20231 275 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 PTGER1P34995 402 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 COILP38432 576 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 OC90Q02509 493 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 KIF5AQ12840 1032 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 TPSAB1Q15661 275 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 TTLL9Q3SXZ7 439 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 THEMIS2Q5TEJ8 643 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 SLC25A25Q6KCM7 469 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 ZNF549Q6P9A3 640 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 MARVELD2Q8N4S9 558 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 CPSF7Q8N684 471 aaKnown RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 HORMAD2Q8N7B1 307 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 KCT2Q8NC54 265 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 MCOLN3Q8TDD5 553 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 ELP5Q8TE02 316 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 OR1F2PQ96R84 312 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 LPAR4Q99677 370 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 OLFM1Q99784 485 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 ANKHQ9HCJ1 492 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 CCDC177Q9NQR7 707 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 TMEM184CQ9NVA4 438 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 INTS10Q9NVR2 710 aaKnown RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 LRFN1Q9P244 771 aa14.44□□□□□ -0.1
CHMP3-202ENST00000393773 DRG1Q9Y295 367 aaKnown RBP14.44□□□□□ -0.1
CHMP3-202ENST00000393773 TCRBV7S3A2A0A539 114 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 ZNF860A6NHJ4 632 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 MAGEB17A8MXT2 336 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 AP3B1O00203 1094 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 HRH2P25021 359 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 TPP2P29144 1249 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-202ENST00000393773 ZNF75DP51815 510 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 RPS6KA1Q15418 735 aa14.43□□□□□ -0.1
CHMP3-202ENST00000393773 KCTD19Q17RG1 926 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-202ENST00000393773 SKOR2Q2VWA4 1001 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-202ENST00000393773 ZNF470Q6ECI4 717 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms